Gene info for DVU3251 in Desulfovibrio vulgaris Hildenborough JW710

Updated annotation (from data): nitrite transporter, HPP family
Rationale: Specifically important in stress Sodium nitrite; nitrogen source Sodium nitrite; stress Sodium nitrate. Related to Synpcc7942_1745, which is a nitrite transporter (PMID:24904028), but it is not clear why this is important both during nitrite stress and when nitrite is the N source
Original annotation: membrane protein, HPP family (TIGR)
Type 1: Protein-coding gene
Located on scaffold 1944, - strand, nucleotides 3,424,152 to 3,424,691
See nucleotide sequence around DVU3251 or for all of scaffold 1944

Other databases: MicrobesOnline, NCBI, uniprot: Q726B4

Nearby Genes

500 ntDVU3247 and DVU3248 are separated by 28 nucleotidesDVU3248 and DVU3249 are separated by 7 nucleotidesDVU3249 and tRNA-Phe are separated by 407 nucleotidestRNA-Phe and DVU3250 are separated by 129 nucleotidesDVU3250 and DVU3251 are separated by 407 nucleotidesDVU3251 and DVU3252 are separated by 10 nucleotidesDVU3252 and DVU3253 are separated by 87 nucleotidesDVU3253 and DVU3254 overlap by 10 nucleotidesDVU3254 and DVU3255 are separated by 35 nucleotidesDVU3255 and mutM are separated by 95 nucleotides DVU3247: DVU3247 - efflux transporter, RND family, MFP subunit (TIGR), at 3,417,458 to 3,418,627 DVU3247 DVU3248: DVU3248 - AcrB/AcrD/AcrF family protein (TIGR), at 3,418,656 to 3,421,799 DVU3248 DVU3249: DVU3249 - lipoprotein, putative (TIGR), at 3,421,807 to 3,422,487 DVU3249 DVU_tRNA-Phe-1: tRNA-Phe - tRNA with anticodon GAA for Phe (VIMSS-AUTO), at 3,422,895 to 3,422,970 tRNA-Phe DVU3250: DVU3250 - hypothetical protein (TIGR), at 3,423,100 to 3,423,744 DVU3250 DVU3251: DVU3251 - nitrite transporter, HPP family (from data), at 3,424,152 to 3,424,691 DVU3251 DVU3252: DVU3252 - hypothetical protein (TIGR), at 3,424,702 to 3,424,953 DVU3252 DVU3253: DVU3253 - phenylacetate-coenzyme A ligase, putative (TIGR), at 3,425,041 to 3,426,306 DVU3253 DVU3254: DVU3254 - PDZ domain protein (TIGR), at 3,426,297 to 3,427,661 DVU3254 DVU3255: DVU3255 - transcriptional regulator, CopG family (TIGR), at 3,427,697 to 3,428,095 DVU3255 DVU3256: mutM - formamidopyrimidine-DNA glycosylase (TIGR), at 3,428,191 to 3,429,288 mutM
Locus Name Description Strand Phenotype
DVU3247 DVU3247 efflux transporter, RND family, MFP subunit (TIGR) + insig.
DVU3248 DVU3248 AcrB/AcrD/AcrF family protein (TIGR) + insig.
DVU3249 DVU3249 lipoprotein, putative (TIGR) + insig.
DVU_tRNA-Phe-1 tRNA-Phe tRNA with anticodon GAA for Phe (VIMSS-AUTO) - no data
DVU3250 DVU3250 hypothetical protein (TIGR) - insig.
DVU3251 DVU3251 nitrite transporter, HPP family (from data) - sig.
DVU3252 DVU3252 hypothetical protein (TIGR) + no data
DVU3253 DVU3253 phenylacetate-coenzyme A ligase, putative (TIGR) + strong
DVU3254 DVU3254 PDZ domain protein (TIGR) + sig.
DVU3255 DVU3255 transcriptional regulator, CopG family (TIGR) + insig.
DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) + insig.

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