Gene info for DVU3106 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: GGDEF domain protein (TIGR)
Type 1: Protein-coding gene
Located on scaffold 1944, - strand, nucleotides 3,252,660 to 3,254,552
See nucleotide sequence around DVU3106 or for all of scaffold 1944

Other databases: MicrobesOnline, NCBI, uniprot: Q726K1

Nearby Genes

500 ntrrf and rrl are separated by 107 nucleotidesrrl and tRNA-Ala are separated by 152 nucleotidestRNA-Ala and tRNA-Ile are separated by 22 nucleotidestRNA-Ile and rrsE are separated by 73 nucleotidesrrsE and DVU3106 are separated by 511 nucleotidesDVU3106 and DVU3107 are separated by 349 nucleotidesDVU3107 and nhaC-2 are separated by 147 nucleotidesnhaC-2 and DVU3109 are separated by 193 nucleotidesDVU3109 and DVU3110 are separated by 39 nucleotidesDVU3110 and DVU3111 are separated by 246 nucleotides Dv5SE: rrf - 5S ribosomal RNA (VIMSS-AUTO), at 3,247,063 to 3,247,179 rrf Dv23SE: rrl - 23S ribosomal RNA (VIMSS-AUTO), at 3,247,287 to 3,250,207 rrl DVU_tRNA-Ala-8: tRNA-Ala - tRNA with anticodon TGC for Ala (VIMSS-AUTO), at 3,250,360 to 3,250,435 tRNA-Ala DVU_tRNA-Ile-5: tRNA-Ile - tRNA with anticodon GAT for Ile (VIMSS-AUTO), at 3,250,458 to 3,250,534 tRNA-Ile Dv16SE: rrsE - 16S ribosomal RNA (RefSeq), at 3,250,608 to 3,252,148 rrsE DVU3106: DVU3106 - GGDEF domain protein (TIGR), at 3,252,660 to 3,254,552 DVU3106 DVU3107: DVU3107 - cytochrome c family protein (TIGR), at 3,254,902 to 3,256,671 DVU3107 DVU3108: nhaC-2 - Na+/H+ antiporter NhaC (TIGR), at 3,256,819 to 3,258,246 nhaC-2 DVU3109: DVU3109 - iron-sulfur cluster-binding protein (TIGR), at 3,258,440 to 3,258,640 DVU3109 DVU3110: DVU3110 - L-aspartate oxidase, putative (TIGR), at 3,258,680 to 3,260,401 DVU3110 DVU3111: DVU3111 - transcriptional regulator, Crp/Fnr family (TIGR), at 3,260,648 to 3,261,457 DVU3111
Locus Name Description Strand Phenotype
Dv5SE rrf 5S ribosomal RNA (VIMSS-AUTO) - no data
Dv23SE rrl 23S ribosomal RNA (VIMSS-AUTO) - no data
DVU_tRNA-Ala-8 tRNA-Ala tRNA with anticodon TGC for Ala (VIMSS-AUTO) - no data
DVU_tRNA-Ile-5 tRNA-Ile tRNA with anticodon GAT for Ile (VIMSS-AUTO) - no data
Dv16SE rrsE 16S ribosomal RNA (RefSeq) - no data
DVU3106 DVU3106 GGDEF domain protein (TIGR) - sig.
DVU3107 DVU3107 cytochrome c family protein (TIGR) + insig.
DVU3108 nhaC-2 Na+/H+ antiporter NhaC (TIGR) - insig.
DVU3109 DVU3109 iron-sulfur cluster-binding protein (TIGR) - insig.
DVU3110 DVU3110 L-aspartate oxidase, putative (TIGR) - insig.
DVU3111 DVU3111 transcriptional regulator, Crp/Fnr family (TIGR) - insig.

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