Gene info for SO4583 in Shewanella oneidensis MR-1

Name: rpoH
Annotation: RNA polymerase sigma-32 factor (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,778,232 to 4,779,089
See nucleotide sequence around SO4583 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8E8S8

Nearby Genes

500 ntSO4578 and SO4579 are separated by 32 nucleotidesSO4579 and SO4580 are separated by 525 nucleotidesSO4580 and SO4581 are separated by 59 nucleotidesSO4581 and SO4582 are separated by 658 nucleotidesSO4582 and rpoH are separated by 543 nucleotidesrpoH and ftsX are separated by 230 nucleotidesftsX and ftsE overlap by 4 nucleotidesftsE and ftsY are separated by 3 nucleotidesftsY and SO4587 are separated by 342 nucleotidesSO4587 and SO4588 are separated by 1 nucleotides SO4578: SO4578 - transposase, putative (NCBI ptt file), at 4,772,518 to 4,773,549 SO4578 SO4579: SO4579 - fimbrial protein, putative (NCBI ptt file), at 4,773,582 to 4,774,142 SO4579 SO4580: SO4580 - ISSod1, transposase OrfB (NCBI ptt file), at 4,774,668 to 4,775,477 SO4580 SO4581: SO4581 - ISSod1, transposase OrfA (NCBI ptt file), at 4,775,537 to 4,775,827 SO4581 SO4582: SO4582 - ISSod4, transposase (NCBI ptt file), at 4,776,486 to 4,777,688 SO4582 SO4583: rpoH - RNA polymerase sigma-32 factor (NCBI ptt file), at 4,778,232 to 4,779,089 rpoH SO4584: ftsX - cell division ABC transporter, permease protein FtsX (NCBI ptt file), at 4,779,320 to 4,780,285 ftsX SO4585: ftsE - cell division ABC transporter, ATP-binding protein FtsE (NCBI ptt file), at 4,780,282 to 4,780,983 ftsE SO4586: ftsY - cell division protein FtsY (NCBI ptt file), at 4,780,987 to 4,782,519 ftsY SO4587: SO4587 - conserved hypothetical protein TIGR00095 (NCBI ptt file), at 4,782,862 to 4,783,434 SO4587 SO4588: SO4588 - conserved hypothetical protein (NCBI ptt file), at 4,783,436 to 4,783,717 SO4588
Locus Name Description Strand Phenotype
SO4578 SO4578 transposase, putative (NCBI ptt file) + no data
SO4579 SO4579 fimbrial protein, putative (NCBI ptt file) - insig.
SO4580 SO4580 ISSod1, transposase OrfB (NCBI ptt file) - no data
SO4581 SO4581 ISSod1, transposase OrfA (NCBI ptt file) - no data
SO4582 SO4582 ISSod4, transposase (NCBI ptt file) - no data
SO4583 rpoH RNA polymerase sigma-32 factor (NCBI ptt file) - no data
SO4584 ftsX cell division ABC transporter, permease protein FtsX (NCBI ptt file) - strong
SO4585 ftsE cell division ABC transporter, ATP-binding protein FtsE (NCBI ptt file) - strong
SO4586 ftsY cell division protein FtsY (NCBI ptt file) - no data
SO4587 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) + strong
SO4588 SO4588 conserved hypothetical protein (NCBI ptt file) + insig.

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