Gene info for SO4573 in Shewanella oneidensis MR-1

Name: menD
Annotation: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 4,766,990 to 4,768,711
See nucleotide sequence around SO4573 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8E8T4

Nearby Genes

500 ntSO4567 and nrfD-2 are separated by 265 nucleotidesnrfD-2 and SO4570 are separated by 63 nucleotidesSO4570 and SO4571 are separated by 230 nucleotidesSO4571 and SO4572 are separated by 177 nucleotidesSO4572 and menD are separated by 190 nucleotidesmenD and SO4574 overlap by 1 nucleotidesSO4574 and menC are separated by 50 nucleotidesmenC and SO4576 are separated by 58 nucleotidesSO4576 and SO4577 are separated by 43 nucleotidesSO4577 and SO4578 are separated by 29 nucleotides SO4567: SO4567 - AsnC family transcriptional regulator (NCBI), at 4,763,020 to 4,763,451 SO4567 SO4568: nrfD-2 - formate-dependent nitrite reductase, nrfD protein (NCBI ptt file), at 4,763,717 to 4,764,658 nrfD-2 SO4570: SO4570 - conserved domain protein (NCBI ptt file), at 4,764,722 to 4,765,129 SO4570 SO4571: SO4571 - transcriptional regulator, LysR family (NCBI ptt file), at 4,765,360 to 4,766,319 SO4571 SO4572: SO4572 - cytochrome c, putative (NCBI ptt file), at 4,766,497 to 4,766,799 SO4572 SO4573: menD - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (NCBI ptt file), at 4,766,990 to 4,768,711 menD SO4574: SO4574 - hydrolase, alpha/beta fold family (NCBI ptt file), at 4,768,711 to 4,769,511 SO4574 SO4575: menC - O-succinylbenzoate-CoA synthase (NCBI ptt file), at 4,769,562 to 4,770,686 menC SO4576: SO4576 - O-succinylbenzoic acid--CoA ligase, putative (NCBI ptt file), at 4,770,745 to 4,772,139 SO4576 SO4577: SO4577 - conserved domain protein (NCBI ptt file), at 4,772,183 to 4,772,488 SO4577 SO4578: SO4578 - transposase, putative (NCBI ptt file), at 4,772,518 to 4,773,549 SO4578
Locus Name Description Strand Phenotype
SO4567 SO4567 AsnC family transcriptional regulator (NCBI) + insig.
SO4568 nrfD-2 formate-dependent nitrite reductase, nrfD protein (NCBI ptt file) - insig.
SO4570 SO4570 conserved domain protein (NCBI ptt file) - insig.
SO4571 SO4571 transcriptional regulator, LysR family (NCBI ptt file) - insig.
SO4572 SO4572 cytochrome c, putative (NCBI ptt file) + insig.
SO4573 menD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (NCBI ptt file) + strong
SO4574 SO4574 hydrolase, alpha/beta fold family (NCBI ptt file) + strong
SO4575 menC O-succinylbenzoate-CoA synthase (NCBI ptt file) + strong
SO4576 SO4576 O-succinylbenzoic acid--CoA ligase, putative (NCBI ptt file) + strong
SO4577 SO4577 conserved domain protein (NCBI ptt file) - insig.
SO4578 SO4578 transposase, putative (NCBI ptt file) + no data

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