Gene info for SO4479 in Shewanella oneidensis MR-1

Annotation: sigma-54 dependent transcriptional regulator (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,667,254 to 4,669,104
See nucleotide sequence around SO4479 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8E916

Nearby Genes

500 ntSO4474 and SO4475 are separated by 115 nucleotidesSO4475 and SO4476 are separated by 50 nucleotidesSO4476 and cpxR are separated by 343 nucleotidescpxR and cpxA are separated by 14 nucleotidescpxA and SO4479 are separated by 77 nucleotidesSO4479 and aldA are separated by 367 nucleotidesaldA and SO4481 are separated by 93 nucleotidesSO4481 and SO4482 are separated by 28 nucleotidesSO4482 and SO4483 are separated by 206 nucleotidesSO4483 and SO4484 are separated by 33 nucleotides SO4474: SO4474 - hypothetical protein (NCBI ptt file), at 4,662,881 to 4,663,234 SO4474 SO4475: SO4475 - cation efflux family protein (NCBI ptt file), at 4,663,350 to 4,664,240 SO4475 SO4476: SO4476 - spheroplast protein y precursor, putative (NCBI ptt file), at 4,664,291 to 4,664,782 SO4476 SO4477: cpxR - transcriptional regulatory protein CpxR (NCBI ptt file), at 4,665,126 to 4,665,812 cpxR SO4478: cpxA - sensor protein CpxA (NCBI ptt file), at 4,665,827 to 4,667,176 cpxA SO4479: SO4479 - sigma-54 dependent transcriptional regulator (NCBI ptt file), at 4,667,254 to 4,669,104 SO4479 SO4480: aldA - aldehyde dehydrogenase (NCBI ptt file), at 4,669,472 to 4,670,992 aldA SO4481: SO4481 - hypothetical protein (NCBI ptt file), at 4,671,086 to 4,671,589 SO4481 SO4482: SO4482 - hypothetical protein (NCBI ptt file), at 4,671,618 to 4,672,040 SO4482 SO4483: SO4483 - cytochrome b, putative (NCBI ptt file), at 4,672,247 to 4,672,843 SO4483 SO4484: SO4484 - cytochrome c-type protein Shp (NCBI ptt file), at 4,672,877 to 4,673,311 SO4484
Locus Name Description Strand Phenotype
SO4474 SO4474 hypothetical protein (NCBI ptt file) - insig.
SO4475 SO4475 cation efflux family protein (NCBI ptt file) - strong
SO4476 SO4476 spheroplast protein y precursor, putative (NCBI ptt file) - insig.
SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) + insig.
SO4478 cpxA sensor protein CpxA (NCBI ptt file) + insig.
SO4479 SO4479 sigma-54 dependent transcriptional regulator (NCBI ptt file) - insig.
SO4480 aldA aldehyde dehydrogenase (NCBI ptt file) + insig.
SO4481 SO4481 hypothetical protein (NCBI ptt file) - insig.
SO4482 SO4482 hypothetical protein (NCBI ptt file) - insig.
SO4483 SO4483 cytochrome b, putative (NCBI ptt file) + insig.
SO4484 SO4484 cytochrome c-type protein Shp (NCBI ptt file) + insig.

Or browse nearby genes

Or see the comparative fitness browser