Gene info for SO4324 in Shewanella oneidensis MR-1

Annotation: GGDEF domain protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 4,512,635 to 4,515,265
See nucleotide sequence around SO4324 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8E9F9

Nearby Genes

500 ntSO4323 and tRNA-Pro-3 are separated by 184 nucleotidestRNA-Pro-3 and tRNA-Pro-2 are separated by 53 nucleotidestRNA-Pro-2 and tRNA-His-2 are separated by 15 nucleotidestRNA-His-2 and tRNA-Arg-2 are separated by 52 nucleotidestRNA-Arg-2 and SO4324 are separated by 206 nucleotidesSO4324 and rep are separated by 225 nucleotidesrep and SO4326 are separated by 283 nucleotidesSO4326 and SO4327 are separated by 25 nucleotidesSO4327 and SO4327.1 are separated by 13 nucleotidesSO4327.1 and SO_4328 overlap by 20 nucleotides SO4323: SO4323 - GGDEF domain protein (NCBI ptt file), at 4,509,898 to 4,511,817 SO4323 SO_t097: tRNA-Pro-3 - tRNA-Pro (RefSeq), at 4,512,002 to 4,512,078 tRNA-Pro-3 SO_t098: tRNA-Pro-2 - tRNA-Pro (RefSeq), at 4,512,132 to 4,512,208 tRNA-Pro-2 SO_t099: tRNA-His-2 - tRNA-His (RefSeq), at 4,512,224 to 4,512,299 tRNA-His-2 SO_t100: tRNA-Arg-2 - tRNA-Arg (RefSeq), at 4,512,352 to 4,512,428 tRNA-Arg-2 SO4324: SO4324 - GGDEF domain protein (NCBI ptt file), at 4,512,635 to 4,515,265 SO4324 SO4325: rep - ATP-dependent DNA helicase Rep (NCBI ptt file), at 4,515,491 to 4,517,506 rep SO4326: SO4326 - transcriptional regulator, TetR family (NCBI ptt file), at 4,517,790 to 4,518,398 SO4326 SO4327: SO4327 - HlyD family secretion domain protein (NCBI ptt file), at 4,518,424 to 4,519,542 SO4327 SO4327.1: SO4327.1 - hypothetical multidrug resistance protein (NCBI ptt file), at 4,519,556 to 4,521,445 SO4327.1 SO_4328: SO_4328 - no description, at 4,521,426 to 4,522,646 _4328
Locus Name Description Strand Phenotype
SO4323 SO4323 GGDEF domain protein (NCBI ptt file) + cofit
SO_t097 tRNA-Pro-3 tRNA-Pro (RefSeq) - no data
SO_t098 tRNA-Pro-2 tRNA-Pro (RefSeq) - no data
SO_t099 tRNA-His-2 tRNA-His (RefSeq) - no data
SO_t100 tRNA-Arg-2 tRNA-Arg (RefSeq) - no data
SO4324 SO4324 GGDEF domain protein (NCBI ptt file) + insig.
SO4325 rep ATP-dependent DNA helicase Rep (NCBI ptt file) - no data
SO4326 SO4326 transcriptional regulator, TetR family (NCBI ptt file) + strong
SO4327 SO4327 HlyD family secretion domain protein (NCBI ptt file) + strong
SO4327.1 SO4327.1 hypothetical multidrug resistance protein (NCBI ptt file) + strong
SO_4328 SO_4328 no description + strong

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