Gene info for SO4323 in Shewanella oneidensis MR-1

Annotation: GGDEF domain protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 4,509,898 to 4,511,817
See nucleotide sequence around SO4323 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8E9G0

Nearby Genes

500 ntrtxB and SO4319 overlap by 80 nucleotidesSO4319 and aggA are separated by 26 nucleotidesaggA and SO4321 overlap by 4 nucleotidesSO4321 and SO4322 are separated by 18 nucleotidesSO4322 and SO4323 are separated by 8 nucleotidesSO4323 and tRNA-Pro-3 are separated by 184 nucleotidestRNA-Pro-3 and tRNA-Pro-2 are separated by 53 nucleotidestRNA-Pro-2 and tRNA-His-2 are separated by 15 nucleotidestRNA-His-2 and tRNA-Arg-2 are separated by 52 nucleotidestRNA-Arg-2 and SO4324 are separated by 206 nucleotides SO4318: rtxB - toxin secretion ATP-binding protein (NCBI ptt file), at 4,503,564 to 4,505,744 rtxB SO4319: SO4319 - HlyD family secretion protein (NCBI ptt file), at 4,505,665 to 4,507,119 SO4319 SO4320: aggA - agglutination protein (NCBI ptt file), at 4,507,146 to 4,508,561 aggA SO4321: SO4321 - OmpA family protein (NCBI ptt file), at 4,508,558 to 4,509,163 SO4321 SO4322: SO4322 - conserved hypothetical protein (NCBI ptt file), at 4,509,182 to 4,509,889 SO4322 SO4323: SO4323 - GGDEF domain protein (NCBI ptt file), at 4,509,898 to 4,511,817 SO4323 SO_t097: tRNA-Pro-3 - tRNA-Pro (RefSeq), at 4,512,002 to 4,512,078 tRNA-Pro-3 SO_t098: tRNA-Pro-2 - tRNA-Pro (RefSeq), at 4,512,132 to 4,512,208 tRNA-Pro-2 SO_t099: tRNA-His-2 - tRNA-His (RefSeq), at 4,512,224 to 4,512,299 tRNA-His-2 SO_t100: tRNA-Arg-2 - tRNA-Arg (RefSeq), at 4,512,352 to 4,512,428 tRNA-Arg-2 SO4324: SO4324 - GGDEF domain protein (NCBI ptt file), at 4,512,635 to 4,515,265 SO4324
Locus Name Description Strand Phenotype
SO4318 rtxB toxin secretion ATP-binding protein (NCBI ptt file) + strong
SO4319 SO4319 HlyD family secretion protein (NCBI ptt file) + strong
SO4320 aggA agglutination protein (NCBI ptt file) + strong
SO4321 SO4321 OmpA family protein (NCBI ptt file) + cofit
SO4322 SO4322 conserved hypothetical protein (NCBI ptt file) + strong
SO4323 SO4323 GGDEF domain protein (NCBI ptt file) + cofit
SO_t097 tRNA-Pro-3 tRNA-Pro (RefSeq) - no data
SO_t098 tRNA-Pro-2 tRNA-Pro (RefSeq) - no data
SO_t099 tRNA-His-2 tRNA-His (RefSeq) - no data
SO_t100 tRNA-Arg-2 tRNA-Arg (RefSeq) - no data
SO4324 SO4324 GGDEF domain protein (NCBI ptt file) + insig.

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