Gene info for SO4314 in Shewanella oneidensis MR-1

Name: hemD
Annotation: uroporphyrinogen-III synthase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 4,491,561 to 4,492,301
See nucleotide sequence around SO4314 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8E9G9

Nearby Genes

500 ntlysA and SO4310 are separated by 42 nucleotidesSO4310 and cyaY are separated by 73 nucleotidescyaY and SO4312 are separated by 40 nucleotidesSO4312 and hemC are separated by 201 nucleotideshemC and hemD are separated by 4 nucleotideshemD and hemX are separated by 60 nucleotideshemX and SO4316 overlap by 4 nucleotidesSO4316 and SO4317 are separated by 382 nucleotidesSO4317 and rtxB are separated by 105 nucleotidesrtxB and SO4319 overlap by 80 nucleotides SO4309: lysA - diaminopimelate decarboxylase (NCBI ptt file), at 4,486,089 to 4,487,333 lysA SO4310: SO4310 - hypothetical protein (NCBI ptt file), at 4,487,376 to 4,487,570 SO4310 SO4311: cyaY - cyay protein (NCBI ptt file), at 4,487,644 to 4,487,967 cyaY SO4312: SO4312 - adenylate cyclase CyaA, putative (NCBI ptt file), at 4,488,008 to 4,490,422 SO4312 SO4313: hemC - porphobilinogen deaminase (NCBI ptt file), at 4,490,624 to 4,491,556 hemC SO4314: hemD - uroporphyrinogen-III synthase (NCBI ptt file), at 4,491,561 to 4,492,301 hemD SO4315: hemX - hemX protein (NCBI ptt file), at 4,492,362 to 4,493,606 hemX SO4316: SO4316 - hemY protein, putative (NCBI ptt file), at 4,493,603 to 4,494,769 SO4316 SO4317: SO4317 - RTX toxin, putative (NCBI ptt file), at 4,495,152 to 4,503,458 SO4317 SO4318: rtxB - toxin secretion ATP-binding protein (NCBI ptt file), at 4,503,564 to 4,505,744 rtxB SO4319: SO4319 - HlyD family secretion protein (NCBI ptt file), at 4,505,665 to 4,507,119 SO4319
Locus Name Description Strand Phenotype
SO4309 lysA diaminopimelate decarboxylase (NCBI ptt file) - strong
SO4310 SO4310 hypothetical protein (NCBI ptt file) - insig.
SO4311 cyaY cyay protein (NCBI ptt file) + strong
SO4312 SO4312 adenylate cyclase CyaA, putative (NCBI ptt file) - strong
SO4313 hemC porphobilinogen deaminase (NCBI ptt file) + no data
SO4314 hemD uroporphyrinogen-III synthase (NCBI ptt file) + no data
SO4315 hemX hemX protein (NCBI ptt file) + strong
SO4316 SO4316 hemY protein, putative (NCBI ptt file) + strong
SO4317 SO4317 RTX toxin, putative (NCBI ptt file) + cofit
SO4318 rtxB toxin secretion ATP-binding protein (NCBI ptt file) + strong
SO4319 SO4319 HlyD family secretion protein (NCBI ptt file) + strong

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