Gene info for SO4309 in Shewanella oneidensis MR-1

Name: lysA
Annotation: diaminopimelate decarboxylase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,486,089 to 4,487,333
See nucleotide sequence around SO4309 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8E9H4

Nearby Genes

500 ntSO4304 and SO4305 are separated by 125 nucleotidesSO4305 and xerC overlap by 1 nucleotidesxerC and SO4307 are separated by 41 nucleotidesSO4307 and dapF are separated by 11 nucleotidesdapF and lysA are separated by 70 nucleotideslysA and SO4310 are separated by 42 nucleotidesSO4310 and cyaY are separated by 73 nucleotidescyaY and SO4312 are separated by 40 nucleotidesSO4312 and hemC are separated by 201 nucleotideshemC and hemD are separated by 4 nucleotides SO4304: SO4304 - conserved hypothetical protein (NCBI ptt file), at 4,482,195 to 4,482,770 SO4304 SO4305: SO4305 - HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file), at 4,482,896 to 4,483,618 SO4305 SO4306: xerC - integrase/recombinase XerC (NCBI ptt file), at 4,483,618 to 4,484,517 xerC SO4307: SO4307 - conserved hypothetical protein (NCBI ptt file), at 4,484,559 to 4,485,179 SO4307 SO4308: dapF - diaminopimelate epimerase (NCBI ptt file), at 4,485,191 to 4,486,018 dapF SO4309: lysA - diaminopimelate decarboxylase (NCBI ptt file), at 4,486,089 to 4,487,333 lysA SO4310: SO4310 - hypothetical protein (NCBI ptt file), at 4,487,376 to 4,487,570 SO4310 SO4311: cyaY - cyay protein (NCBI ptt file), at 4,487,644 to 4,487,967 cyaY SO4312: SO4312 - adenylate cyclase CyaA, putative (NCBI ptt file), at 4,488,008 to 4,490,422 SO4312 SO4313: hemC - porphobilinogen deaminase (NCBI ptt file), at 4,490,624 to 4,491,556 hemC SO4314: hemD - uroporphyrinogen-III synthase (NCBI ptt file), at 4,491,561 to 4,492,301 hemD
Locus Name Description Strand Phenotype
SO4304 SO4304 conserved hypothetical protein (NCBI ptt file) - insig.
SO4305 SO4305 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file) - strong
SO4306 xerC integrase/recombinase XerC (NCBI ptt file) - strong
SO4307 SO4307 conserved hypothetical protein (NCBI ptt file) - strong
SO4308 dapF diaminopimelate epimerase (NCBI ptt file) - no data
SO4309 lysA diaminopimelate decarboxylase (NCBI ptt file) - strong
SO4310 SO4310 hypothetical protein (NCBI ptt file) - insig.
SO4311 cyaY cyay protein (NCBI ptt file) + strong
SO4312 SO4312 adenylate cyclase CyaA, putative (NCBI ptt file) - strong
SO4313 hemC porphobilinogen deaminase (NCBI ptt file) + no data
SO4314 hemD uroporphyrinogen-III synthase (NCBI ptt file) + no data

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