Gene info for SO4239 in Shewanella oneidensis MR-1

Annotation: ISSod3, transposase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,416,254 to 4,417,468
See nucleotide sequence around SO4239 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 ntleuD and leuC are separated by 24 nucleotidesleuC and leuB overlap by 1 nucleotidesleuB and leuA are separated by 51 nucleotidesleuA and SO4238 are separated by 496 nucleotidesSO4238 and SO4239 overlap by 13 nucleotidesSO4239 and SO4240 are separated by 178 nucleotidesSO4240 and recQ overlap by 19 nucleotidesrecQ and SO4242 are separated by 251 nucleotidesSO4242 and rarD are separated by 216 nucleotidesrarD and SO4244 are separated by 43 nucleotides SO4233: leuD - 3-isopropylmalate dehydratase, small subunit (NCBI ptt file), at 4,410,417 to 4,411,022 leuD SO4234: leuC - 3-isopropylmalate dehydratase, large subunit (NCBI ptt file), at 4,411,047 to 4,412,471 leuC SO4235: leuB - 3-isopropylmalate dehydrogenase (NCBI ptt file), at 4,412,471 to 4,413,565 leuB SO4236: leuA - 2-isopropylmalate synthase (NCBI ptt file), at 4,413,617 to 4,415,185 leuA SO4238: SO4238 - TPR domain protein (NCBI ptt file), at 4,415,682 to 4,416,266 SO4238 SO4239: SO4239 - ISSod3, transposase (NCBI ptt file), at 4,416,254 to 4,417,468 SO4239 SO4240: SO4240 - hypothetical protein (NCBI ptt file), at 4,417,647 to 4,418,807 SO4240 SO4241: recQ - ATP-dependent DNA helicase RecQ (NCBI ptt file), at 4,418,789 to 4,420,612 recQ SO4242: SO4242 - conserved hypothetical protein (NCBI ptt file), at 4,420,864 to 4,421,328 SO4242 SO4243: rarD - rarD protein (NCBI ptt file), at 4,421,545 to 4,422,429 rarD SO4244: SO4244 - hypothetical protein (NCBI ptt file), at 4,422,473 to 4,422,991 SO4244
Locus Name Description Strand Phenotype
SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) - strong
SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) - strong
SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) - strong
SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) - strong
SO4238 SO4238 TPR domain protein (NCBI ptt file) + insig.
SO4239 SO4239 ISSod3, transposase (NCBI ptt file) - no data
SO4240 SO4240 hypothetical protein (NCBI ptt file) + insig.
SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) - strong
SO4242 SO4242 conserved hypothetical protein (NCBI ptt file) + insig.
SO4243 rarD rarD protein (NCBI ptt file) + sig.
SO4244 SO4244 hypothetical protein (NCBI ptt file) - insig.

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