Gene info for SO4090 in Shewanella oneidensis MR-1

Annotation: outer membrane efflux protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,244,212 to 4,245,633
See nucleotide sequence around SO4090 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EA19

Nearby Genes

500 ntSO4081 and chiA are separated by 712 nucleotideschiA and SO4087 are separated by 159 nucleotidesSO4087 and SO4088 are separated by 1 nucleotidesSO4088 and SO4089 are separated by 5 nucleotidesSO4089 and SO4090 overlap by 11 nucleotidesSO4090 and tldD are separated by 133 nucleotidestldD and SO4092 are separated by 139 nucleotidesSO4092 and SO4093 overlap by 77 nucleotidesSO4093 and cafA overlap by 1 nucleotidescafA and maf are separated by 175 nucleotides SO4081: SO4081 - amino acid permease (NCBI ptt file), at 4,236,494 to 4,237,825 SO4081 SO4085: chiA - chitinase A (NCBI ptt file), at 4,238,538 to 4,240,637 chiA SO4087: SO4087 - conserved hypothetical protein (NCBI ptt file), at 4,240,797 to 4,241,933 SO4087 SO4088: SO4088 - conserved hypothetical protein (NCBI ptt file), at 4,241,935 to 4,243,242 SO4088 SO4089: SO4089 - HlyD family secretion protein (NCBI ptt file), at 4,243,248 to 4,244,222 SO4089 SO4090: SO4090 - outer membrane efflux protein (NCBI ptt file), at 4,244,212 to 4,245,633 SO4090 SO4091: tldD - tldD protein (NCBI ptt file), at 4,245,767 to 4,247,215 tldD SO4092: SO4092 - hydrolase, carbon-nitrogen family (NCBI ptt file), at 4,247,355 to 4,248,203 SO4092 SO4093: SO4093 - conserved hypothetical protein (NCBI ptt file), at 4,248,127 to 4,252,299 SO4093 SO4094: cafA - ribonuclease G (NCBI ptt file), at 4,252,299 to 4,253,765 cafA SO4095: maf - maf protein (NCBI ptt file), at 4,253,941 to 4,254,525 maf
Locus Name Description Strand Phenotype
SO4081 SO4081 amino acid permease (NCBI ptt file) - insig.
SO4085 chiA chitinase A (NCBI ptt file) + insig.
SO4087 SO4087 conserved hypothetical protein (NCBI ptt file) - strong
SO4088 SO4088 conserved hypothetical protein (NCBI ptt file) - strong
SO4089 SO4089 HlyD family secretion protein (NCBI ptt file) - strong
SO4090 SO4090 outer membrane efflux protein (NCBI ptt file) - strong
SO4091 tldD tldD protein (NCBI ptt file) - sig.
SO4092 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) - strong
SO4093 SO4093 conserved hypothetical protein (NCBI ptt file) - cofit
SO4094 cafA ribonuclease G (NCBI ptt file) - strong
SO4095 maf maf protein (NCBI ptt file) - sig.

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