Gene info for SO4008 in Shewanella oneidensis MR-1

Updated annotation (from data): smc-like chromosome partitioning protein (DUF3584)
Rationale: Conserved phenotypes: important for motility and cisplatin resistance. DUF3584 is distantly related to smc proteins.
Original annotation: hypothetical protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,149,700 to 4,153,350
See nucleotide sequence around SO4008 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EAA0

Nearby Genes

500 ntSO4003 and SO4004 are separated by 244 nucleotidesSO4004 and SO4005 are separated by 390 nucleotidesSO4005 and SO4006 overlap by 13 nucleotidesSO4006 and SO4007 are separated by 39 nucleotidesSO4007 and SO4008 overlap by 1 nucleotidesSO4008 and SO4010 are separated by 314 nucleotidesSO4010 and SO4011 are separated by 83 nucleotidesSO4011 and SO4012 are separated by 130 nucleotidesSO4012 and SO4013 are separated by 70 nucleotidesSO4013 and SO4014 are separated by 114 nucleotides SO4003: SO4003 - response regulator (NCBI ptt file), at 4,143,980 to 4,145,053 SO4003 SO4004: SO4004 - proton/glutamate symporter, putative (NCBI ptt file), at 4,145,298 to 4,146,524 SO4004 SO4005: SO4005 - hypothetical protein (NCBI ptt file), at 4,146,915 to 4,147,787 SO4005 SO4006: SO4006 - predicted chromosome partitioning protein (with smc-like SO4008) (from data), at 4,147,775 to 4,148,998 SO4006 SO4007: SO4007 - predicted chromosome partitioning protein (with smc-like SO4008) (from data), at 4,149,038 to 4,149,700 SO4007 SO4008: SO4008 - smc-like chromosome partitioning protein (DUF3584) (from data), at 4,149,700 to 4,153,350 SO4008 SO4010: SO4010 - hypothetical protein (NCBI ptt file), at 4,153,665 to 4,153,808 SO4010 SO4011: SO4011 - conserved hypothetical protein (NCBI ptt file), at 4,153,892 to 4,154,593 SO4011 SO4012: SO4012 - hypothetical protein (NCBI ptt file), at 4,154,724 to 4,155,002 SO4012 SO4013: SO4013 - hypothetical protein (NCBI ptt file), at 4,155,073 to 4,156,896 SO4013 SO4014: SO4014 - AcrB/AcrD/AcrF family protein (NCBI ptt file), at 4,157,011 to 4,160,082 SO4014
Locus Name Description Strand Phenotype
SO4003 SO4003 response regulator (NCBI ptt file) + insig.
SO4004 SO4004 proton/glutamate symporter, putative (NCBI ptt file) - insig.
SO4005 SO4005 hypothetical protein (NCBI ptt file) - insig.
SO4006 SO4006 predicted chromosome partitioning protein (with smc-like SO4008) (from data) - strong
SO4007 SO4007 predicted chromosome partitioning protein (with smc-like SO4008) (from data) - strong
SO4008 SO4008 smc-like chromosome partitioning protein (DUF3584) (from data) - strong
SO4010 SO4010 hypothetical protein (NCBI ptt file) + no data
SO4011 SO4011 conserved hypothetical protein (NCBI ptt file) - sig.
SO4012 SO4012 hypothetical protein (NCBI ptt file) - insig.
SO4013 SO4013 hypothetical protein (NCBI ptt file) - insig.
SO4014 SO4014 AcrB/AcrD/AcrF family protein (NCBI ptt file) - strong

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