Gene info for SO4006 in Shewanella oneidensis MR-1

Updated annotation (from data): predicted chromosome partitioning protein (with smc-like SO4008)
Rationale: conserved cofit with smc-like (SO4008)
Original annotation: hypothetical protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,147,775 to 4,148,998
See nucleotide sequence around SO4006 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EAA2

Nearby Genes

500 ntSO4001 and SO4002 are separated by 3 nucleotidesSO4002 and SO4003 are separated by 227 nucleotidesSO4003 and SO4004 are separated by 244 nucleotidesSO4004 and SO4005 are separated by 390 nucleotidesSO4005 and SO4006 overlap by 13 nucleotidesSO4006 and SO4007 are separated by 39 nucleotidesSO4007 and SO4008 overlap by 1 nucleotidesSO4008 and SO4010 are separated by 314 nucleotidesSO4010 and SO4011 are separated by 83 nucleotidesSO4011 and SO4012 are separated by 130 nucleotides SO4001: SO4001 - chemotaxis protein CheY/response regulator receiver domain protein (NCBI ptt file), at 4,137,990 to 4,138,679 SO4001 SO4002: SO4002 - sensory transduction histidine kinase (NCBI ptt file), at 4,138,683 to 4,143,752 SO4002 SO4003: SO4003 - response regulator (NCBI ptt file), at 4,143,980 to 4,145,053 SO4003 SO4004: SO4004 - proton/glutamate symporter, putative (NCBI ptt file), at 4,145,298 to 4,146,524 SO4004 SO4005: SO4005 - hypothetical protein (NCBI ptt file), at 4,146,915 to 4,147,787 SO4005 SO4006: SO4006 - predicted chromosome partitioning protein (with smc-like SO4008) (from data), at 4,147,775 to 4,148,998 SO4006 SO4007: SO4007 - predicted chromosome partitioning protein (with smc-like SO4008) (from data), at 4,149,038 to 4,149,700 SO4007 SO4008: SO4008 - smc-like chromosome partitioning protein (DUF3584) (from data), at 4,149,700 to 4,153,350 SO4008 SO4010: SO4010 - hypothetical protein (NCBI ptt file), at 4,153,665 to 4,153,808 SO4010 SO4011: SO4011 - conserved hypothetical protein (NCBI ptt file), at 4,153,892 to 4,154,593 SO4011 SO4012: SO4012 - hypothetical protein (NCBI ptt file), at 4,154,724 to 4,155,002 SO4012
Locus Name Description Strand Phenotype
SO4001 SO4001 chemotaxis protein CheY/response regulator receiver domain protein (NCBI ptt file) - insig.
SO4002 SO4002 sensory transduction histidine kinase (NCBI ptt file) - strong
SO4003 SO4003 response regulator (NCBI ptt file) + insig.
SO4004 SO4004 proton/glutamate symporter, putative (NCBI ptt file) - insig.
SO4005 SO4005 hypothetical protein (NCBI ptt file) - insig.
SO4006 SO4006 predicted chromosome partitioning protein (with smc-like SO4008) (from data) - strong
SO4007 SO4007 predicted chromosome partitioning protein (with smc-like SO4008) (from data) - strong
SO4008 SO4008 smc-like chromosome partitioning protein (DUF3584) (from data) - strong
SO4010 SO4010 hypothetical protein (NCBI ptt file) + no data
SO4011 SO4011 conserved hypothetical protein (NCBI ptt file) - sig.
SO4012 SO4012 hypothetical protein (NCBI ptt file) - insig.

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