Gene info for SO3904 in Shewanella oneidensis MR-1

Name: tolC
Annotation: outer membrane protein TolC (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 4,051,556 to 4,052,863
See nucleotide sequence around SO3904 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EAJ8

Nearby Genes

500 ntparE and SO3900 are separated by 56 nucleotidesSO3900 and icc are separated by 26 nucleotidesicc and SO3902 are separated by 15 nucleotidesSO3902 and SO3903 are separated by 13 nucleotidesSO3903 and tolC are separated by 241 nucleotidestolC and SO3905 are separated by 82 nucleotidesSO3905 and SO3906 are separated by 44 nucleotidesSO3906 and SO3907 are separated by 11 nucleotidesSO3907 and SO3908 are separated by 34 nucleotidesSO3908 and SO3909 are separated by 136 nucleotides SO3899: parE - DNA topoisomerase IV, B subunit (NCBI ptt file), at 4,046,861 to 4,048,747 parE SO3900: SO3900 - yqiA-like hydrolase, affects the cell envelope (from data), at 4,048,804 to 4,049,379 SO3900 SO3901: icc - lacZ expression regulator (NCBI ptt file), at 4,049,406 to 4,050,242 icc SO3902: SO3902 - conserved hypothetical protein (NCBI ptt file), at 4,050,258 to 4,050,698 SO3902 SO3903: SO3903 - MutT/nudix family protein (NCBI ptt file), at 4,050,712 to 4,051,314 SO3903 SO3904: tolC - outer membrane protein TolC (NCBI ptt file), at 4,051,556 to 4,052,863 tolC SO3905: SO3905 - conserved hypothetical protein (NCBI ptt file), at 4,052,946 to 4,053,641 SO3905 SO3906: SO3906 - conserved hypothetical protein (NCBI ptt file), at 4,053,686 to 4,054,654 SO3906 SO3907: SO3907 - conserved hypothetical protein (NCBI ptt file), at 4,054,666 to 4,055,148 SO3907 SO3908: SO3908 - enoyl-CoA hydratase/isomerase family protein (NCBI ptt file), at 4,055,183 to 4,055,920 SO3908 SO3909: SO3909 - conserved hypothetical protein (NCBI ptt file), at 4,056,057 to 4,056,257 SO3909
Locus Name Description Strand Phenotype
SO3899 parE DNA topoisomerase IV, B subunit (NCBI ptt file) - no data
SO3900 SO3900 yqiA-like hydrolase, affects the cell envelope (from data) - strong
SO3901 icc lacZ expression regulator (NCBI ptt file) - strong
SO3902 SO3902 conserved hypothetical protein (NCBI ptt file) - strong
SO3903 SO3903 MutT/nudix family protein (NCBI ptt file) - insig.
SO3904 tolC outer membrane protein TolC (NCBI ptt file) + strong
SO3905 SO3905 conserved hypothetical protein (NCBI ptt file) - insig.
SO3906 SO3906 conserved hypothetical protein (NCBI ptt file) - sig.
SO3907 SO3907 conserved hypothetical protein (NCBI ptt file) - sig.
SO3908 SO3908 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) + insig.
SO3909 SO3909 conserved hypothetical protein (NCBI ptt file) - strong

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