Gene info for SO3901 in Shewanella oneidensis MR-1

Name: icc
Annotation: lacZ expression regulator (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 4,049,406 to 4,050,242
See nucleotide sequence around SO3901 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EAK1

Nearby Genes

500 ntSO3896 and parC are separated by 198 nucleotidesparC and SO3898 overlap by 8 nucleotidesSO3898 and parE are separated by 53 nucleotidesparE and SO3900 are separated by 56 nucleotidesSO3900 and icc are separated by 26 nucleotidesicc and SO3902 are separated by 15 nucleotidesSO3902 and SO3903 are separated by 13 nucleotidesSO3903 and tolC are separated by 241 nucleotidestolC and SO3905 are separated by 82 nucleotidesSO3905 and SO3906 are separated by 44 nucleotides SO3896: SO3896 - outer membrane porin, putative (NCBI ptt file), at 4,042,055 to 4,043,164 SO3896 SO3897: parC - DNA topoisomerase IV, A subunit (NCBI ptt file), at 4,043,363 to 4,045,639 parC SO3898: SO3898 - L-sorbosone dehydrogenase, putative (NCBI ptt file), at 4,045,632 to 4,046,807 SO3898 SO3899: parE - DNA topoisomerase IV, B subunit (NCBI ptt file), at 4,046,861 to 4,048,747 parE SO3900: SO3900 - yqiA-like hydrolase, affects the cell envelope (from data), at 4,048,804 to 4,049,379 SO3900 SO3901: icc - lacZ expression regulator (NCBI ptt file), at 4,049,406 to 4,050,242 icc SO3902: SO3902 - conserved hypothetical protein (NCBI ptt file), at 4,050,258 to 4,050,698 SO3902 SO3903: SO3903 - MutT/nudix family protein (NCBI ptt file), at 4,050,712 to 4,051,314 SO3903 SO3904: tolC - outer membrane protein TolC (NCBI ptt file), at 4,051,556 to 4,052,863 tolC SO3905: SO3905 - conserved hypothetical protein (NCBI ptt file), at 4,052,946 to 4,053,641 SO3905 SO3906: SO3906 - conserved hypothetical protein (NCBI ptt file), at 4,053,686 to 4,054,654 SO3906
Locus Name Description Strand Phenotype
SO3896 SO3896 outer membrane porin, putative (NCBI ptt file) + strong
SO3897 parC DNA topoisomerase IV, A subunit (NCBI ptt file) - no data
SO3898 SO3898 L-sorbosone dehydrogenase, putative (NCBI ptt file) - sig.
SO3899 parE DNA topoisomerase IV, B subunit (NCBI ptt file) - no data
SO3900 SO3900 yqiA-like hydrolase, affects the cell envelope (from data) - strong
SO3901 icc lacZ expression regulator (NCBI ptt file) - strong
SO3902 SO3902 conserved hypothetical protein (NCBI ptt file) - strong
SO3903 SO3903 MutT/nudix family protein (NCBI ptt file) - insig.
SO3904 tolC outer membrane protein TolC (NCBI ptt file) + strong
SO3905 SO3905 conserved hypothetical protein (NCBI ptt file) - insig.
SO3906 SO3906 conserved hypothetical protein (NCBI ptt file) - sig.

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