Gene info for SO3896 in Shewanella oneidensis MR-1

Annotation: outer membrane porin, putative (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 4,042,055 to 4,043,164
See nucleotide sequence around SO3896 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EAK6

Nearby Genes

500 nttRNA-Leu-3 and SO3890 are separated by 324 nucleotidesSO3890 and SO3892 are separated by 566 nucleotidesSO3892 and SO3894 are separated by 265 nucleotidesSO3894 and SO3895 are separated by 74 nucleotidesSO3895 and SO3896 are separated by 1022 nucleotidesSO3896 and parC are separated by 198 nucleotidesparC and SO3898 overlap by 8 nucleotidesSO3898 and parE are separated by 53 nucleotidesparE and SO3900 are separated by 56 nucleotidesSO3900 and icc are separated by 26 nucleotides SO_t094: tRNA-Leu-3 - tRNA-Leu (RefSeq), at 4,035,175 to 4,035,261 tRNA-Leu-3 SO3890: SO3890 - methyl-accepting chemotaxis protein (NCBI ptt file), at 4,035,586 to 4,037,175 SO3890 SO3892: SO3892 - hypothetical protein (NCBI ptt file), at 4,037,742 to 4,038,257 SO3892 SO3894: SO3894 - sensor histidine kinase (NCBI ptt file), at 4,038,523 to 4,040,154 SO3894 SO3895: SO3895 - HesA/MoeB/ThiF family protein (NCBI ptt file), at 4,040,229 to 4,041,032 SO3895 SO3896: SO3896 - outer membrane porin, putative (NCBI ptt file), at 4,042,055 to 4,043,164 SO3896 SO3897: parC - DNA topoisomerase IV, A subunit (NCBI ptt file), at 4,043,363 to 4,045,639 parC SO3898: SO3898 - L-sorbosone dehydrogenase, putative (NCBI ptt file), at 4,045,632 to 4,046,807 SO3898 SO3899: parE - DNA topoisomerase IV, B subunit (NCBI ptt file), at 4,046,861 to 4,048,747 parE SO3900: SO3900 - yqiA-like hydrolase, affects the cell envelope (from data), at 4,048,804 to 4,049,379 SO3900 SO3901: icc - lacZ expression regulator (NCBI ptt file), at 4,049,406 to 4,050,242 icc
Locus Name Description Strand Phenotype
SO_t094 tRNA-Leu-3 tRNA-Leu (RefSeq) - no data
SO3890 SO3890 methyl-accepting chemotaxis protein (NCBI ptt file) - insig.
SO3892 SO3892 hypothetical protein (NCBI ptt file) - insig.
SO3894 SO3894 sensor histidine kinase (NCBI ptt file) + insig.
SO3895 SO3895 HesA/MoeB/ThiF family protein (NCBI ptt file) - strong
SO3896 SO3896 outer membrane porin, putative (NCBI ptt file) + strong
SO3897 parC DNA topoisomerase IV, A subunit (NCBI ptt file) - no data
SO3898 SO3898 L-sorbosone dehydrogenase, putative (NCBI ptt file) - sig.
SO3899 parE DNA topoisomerase IV, B subunit (NCBI ptt file) - no data
SO3900 SO3900 yqiA-like hydrolase, affects the cell envelope (from data) - strong
SO3901 icc lacZ expression regulator (NCBI ptt file) - strong

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