Gene info for SO3565 in Shewanella oneidensis MR-1

Name: cpdB
Annotation: 2',3'-cyclic-nucleotide 2'-phosphodiesterase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 3,727,570 to 3,729,627
See nucleotide sequence around SO3565 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBF3

Nearby Genes

500 ntSO3560 and SO3561 are separated by 141 nucleotidesSO3561 and SO3562 are separated by 287 nucleotidesSO3562 and SO3563 are separated by 67 nucleotidesSO3563 and dcp-2 are separated by 220 nucleotidesdcp-2 and cpdB are separated by 683 nucleotidescpdB and SO_3566 are separated by 42 nucleotidesSO_3566 and SO3567 overlap by 4 nucleotidesSO3567 and SO_3568 are separated by 106 nucleotidesSO_3568 and SO3569 are separated by 120 nucleotidesSO3569 and SO3570 are separated by 59 nucleotides SO3560: SO3560 - peptidase, M16 family (NCBI ptt file), at 3,718,879 to 3,721,728 SO3560 SO3561: SO3561 - conserved hypothetical protein (NCBI ptt file), at 3,721,870 to 3,722,295 SO3561 SO3562: SO3562 - proton/glutamate symporter, putative (NCBI ptt file), at 3,722,583 to 3,723,824 SO3562 SO3563: SO3563 - SM-20 domain protein (NCBI ptt file), at 3,723,892 to 3,724,515 SO3563 SO3564: dcp-2 - peptidyl-dipeptidase Dcp (NCBI ptt file), at 3,724,736 to 3,726,886 dcp-2 SO3565: cpdB - 2',3'-cyclic-nucleotide 2'-phosphodiesterase (NCBI ptt file), at 3,727,570 to 3,729,627 cpdB SO_3566: SO_3566 - no description, at 3,729,670 to 3,730,770 _3566 SO3567: SO3567 - ISSod3, transposase (NCBI ptt file), at 3,730,767 to 3,731,981 SO3567 SO_3568: SO_3568 - no description, at 3,732,088 to 3,732,219 _3568 SO3569: SO3569 - ISSod1, transposase OrfA (NCBI ptt file), at 3,732,340 to 3,732,630 SO3569 SO3570: SO3570 - ISSod1, transposase OrfB (NCBI ptt file), at 3,732,690 to 3,733,499 SO3570
Locus Name Description Strand Phenotype
SO3560 SO3560 peptidase, M16 family (NCBI ptt file) - strong
SO3561 SO3561 conserved hypothetical protein (NCBI ptt file) - insig.
SO3562 SO3562 proton/glutamate symporter, putative (NCBI ptt file) + strong
SO3563 SO3563 SM-20 domain protein (NCBI ptt file) - insig.
SO3564 dcp-2 peptidyl-dipeptidase Dcp (NCBI ptt file) - insig.
SO3565 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase (NCBI ptt file) + insig.
SO_3566 SO_3566 no description - no data
SO3567 SO3567 ISSod3, transposase (NCBI ptt file) - no data
SO_3568 SO_3568 no description - no data
SO3569 SO3569 ISSod1, transposase OrfA (NCBI ptt file) + no data
SO3570 SO3570 ISSod1, transposase OrfB (NCBI ptt file) + no data

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