Gene info for SO3471 in Shewanella oneidensis MR-1

Name: glyA
Annotation: serine hydroxymethyltransferase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 3,616,031 to 3,617,284
See nucleotide sequence around SO3471 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBN8

Nearby Genes

500 ntribH and ribBA are separated by 140 nucleotidesribBA and ribE-2 are separated by 66 nucleotidesribE-2 and ribD are separated by 7 nucleotidesribD and SO3470 are separated by 73 nucleotidesSO3470 and glyA are separated by 190 nucleotidesglyA and SO3472 are separated by 190 nucleotidesSO3472 and SO3473 are separated by 126 nucleotidesSO3473 and SO3474 are separated by 198 nucleotidesSO3474 and SO3475 are separated by 111 nucleotidesSO3475 and SO3476 are separated by 127 nucleotides SO3466: ribH - riboflavin synthase, beta subunit (NCBI ptt file), at 3,611,721 to 3,612,197 ribH SO3467: ribBA - 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative (NCBI ptt file), at 3,612,338 to 3,613,441 ribBA SO3468: ribE-2 - riboflavin synthase, alpha subunit (NCBI ptt file), at 3,613,508 to 3,614,164 ribE-2 SO3469: ribD - riboflavin biosynthesis protein RibD (NCBI ptt file), at 3,614,172 to 3,615,317 ribD SO3470: SO3470 - conserved hypothetical protein TIGR00244 (NCBI ptt file), at 3,615,391 to 3,615,840 SO3470 SO3471: glyA - serine hydroxymethyltransferase (NCBI ptt file), at 3,616,031 to 3,617,284 glyA SO3472: SO3472 - ABC transporter, ATP-binding protein (NCBI ptt file), at 3,617,475 to 3,619,142 SO3472 SO3473: SO3473 - transcriptional regulator, LysR family (NCBI ptt file), at 3,619,269 to 3,620,192 SO3473 SO3474: SO3474 - metallo-beta-lactamase family protein (NCBI ptt file), at 3,620,391 to 3,621,290 SO3474 SO3475: SO3475 - conserved hypothetical protein (NCBI ptt file), at 3,621,402 to 3,622,067 SO3475 SO3476: SO3476 - hypothetical protein (NCBI ptt file), at 3,622,195 to 3,622,530 SO3476
Locus Name Description Strand Phenotype
SO3466 ribH riboflavin synthase, beta subunit (NCBI ptt file) - no data
SO3467 ribBA 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative (NCBI ptt file) - strong
SO3468 ribE-2 riboflavin synthase, alpha subunit (NCBI ptt file) - strong
SO3469 ribD riboflavin biosynthesis protein RibD (NCBI ptt file) - no data
SO3470 SO3470 conserved hypothetical protein TIGR00244 (NCBI ptt file) - strong
SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) - strong
SO3472 SO3472 ABC transporter, ATP-binding protein (NCBI ptt file) + strong
SO3473 SO3473 transcriptional regulator, LysR family (NCBI ptt file) - sig.
SO3474 SO3474 metallo-beta-lactamase family protein (NCBI ptt file) + insig.
SO3475 SO3475 conserved hypothetical protein (NCBI ptt file) + insig.
SO3476 SO3476 hypothetical protein (NCBI ptt file) - sig.

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