Gene info for SO3469 in Shewanella oneidensis MR-1

Name: ribD
Annotation: riboflavin biosynthesis protein RibD (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 3,614,172 to 3,615,317
See nucleotide sequence around SO3469 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBP0

Nearby Genes

500 ntthiL and nusB are separated by 78 nucleotidesnusB and ribH are separated by 14 nucleotidesribH and ribBA are separated by 140 nucleotidesribBA and ribE-2 are separated by 66 nucleotidesribE-2 and ribD are separated by 7 nucleotidesribD and SO3470 are separated by 73 nucleotidesSO3470 and glyA are separated by 190 nucleotidesglyA and SO3472 are separated by 190 nucleotidesSO3472 and SO3473 are separated by 126 nucleotidesSO3473 and SO3474 are separated by 198 nucleotides SO3464: thiL - thiamin-monophosphate kinase (NCBI ptt file), at 3,610,267 to 3,611,223 thiL SO3465: nusB - N utilization substance protein B (NCBI ptt file), at 3,611,302 to 3,611,706 nusB SO3466: ribH - riboflavin synthase, beta subunit (NCBI ptt file), at 3,611,721 to 3,612,197 ribH SO3467: ribBA - 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative (NCBI ptt file), at 3,612,338 to 3,613,441 ribBA SO3468: ribE-2 - riboflavin synthase, alpha subunit (NCBI ptt file), at 3,613,508 to 3,614,164 ribE-2 SO3469: ribD - riboflavin biosynthesis protein RibD (NCBI ptt file), at 3,614,172 to 3,615,317 ribD SO3470: SO3470 - conserved hypothetical protein TIGR00244 (NCBI ptt file), at 3,615,391 to 3,615,840 SO3470 SO3471: glyA - serine hydroxymethyltransferase (NCBI ptt file), at 3,616,031 to 3,617,284 glyA SO3472: SO3472 - ABC transporter, ATP-binding protein (NCBI ptt file), at 3,617,475 to 3,619,142 SO3472 SO3473: SO3473 - transcriptional regulator, LysR family (NCBI ptt file), at 3,619,269 to 3,620,192 SO3473 SO3474: SO3474 - metallo-beta-lactamase family protein (NCBI ptt file), at 3,620,391 to 3,621,290 SO3474
Locus Name Description Strand Phenotype
SO3464 thiL thiamin-monophosphate kinase (NCBI ptt file) - no data
SO3465 nusB N utilization substance protein B (NCBI ptt file) - no data
SO3466 ribH riboflavin synthase, beta subunit (NCBI ptt file) - no data
SO3467 ribBA 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative (NCBI ptt file) - strong
SO3468 ribE-2 riboflavin synthase, alpha subunit (NCBI ptt file) - strong
SO3469 ribD riboflavin biosynthesis protein RibD (NCBI ptt file) - no data
SO3470 SO3470 conserved hypothetical protein TIGR00244 (NCBI ptt file) - strong
SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) - strong
SO3472 SO3472 ABC transporter, ATP-binding protein (NCBI ptt file) + strong
SO3473 SO3473 transcriptional regulator, LysR family (NCBI ptt file) - sig.
SO3474 SO3474 metallo-beta-lactamase family protein (NCBI ptt file) + insig.

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