Gene info for SO3461 in Shewanella oneidensis MR-1

Updated annotation (from data): Fatty acid transporter
Rationale: Specific phenotype on Tween-20, which is hydrolyzed extracellularly to fatty acids (typically around 12 carbons). This protein is distantly related (PF03547) to auxin efflux transporters in plants and to the malate permease mleT of Lactobacillus casei (PMID: 23835171)
Original annotation: transporter, putative (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 3,606,889 to 3,607,848
See nucleotide sequence around SO3461 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBP8

Nearby Genes

500 ntSO3456 and SO_3457 are separated by 102 nucleotidesSO_3457 and SO3458 overlap by 26 nucleotidesSO3458 and SO3459 are separated by 155 nucleotidesSO3459 and SO3460 overlap by 4 nucleotidesSO3460 and SO3461 are separated by 274 nucleotidesSO3461 and recN are separated by 129 nucleotidesrecN and pgpA are separated by 136 nucleotidespgpA and thiL overlap by 1 nucleotidesthiL and nusB are separated by 78 nucleotidesnusB and ribH are separated by 14 nucleotides SO3456: SO3456 - RNA methyltransferase, TrmA family (NCBI ptt file), at 3,600,490 to 3,601,839 SO3456 SO_3457: SO_3457 - hybrid sensory histidine kinase BarA (RefSeq), at 3,601,942 to 3,604,749 _3457 SO3458: SO3458 - conserved hypothetical protein (NCBI ptt file), at 3,604,724 to 3,605,323 SO3458 SO3459: SO3459 - hypothetical protein (NCBI ptt file), at 3,605,479 to 3,605,718 SO3459 SO3460: SO3460 - transcriptional regulator, LysR family (NCBI ptt file), at 3,605,715 to 3,606,614 SO3460 SO3461: SO3461 - Fatty acid transporter (from data), at 3,606,889 to 3,607,848 SO3461 SO3462: recN - DNA repair protein RecN (NCBI ptt file), at 3,607,978 to 3,609,636 recN SO3463: pgpA - phosphatidylglycerophosphatase A (NCBI ptt file), at 3,609,773 to 3,610,267 pgpA SO3464: thiL - thiamin-monophosphate kinase (NCBI ptt file), at 3,610,267 to 3,611,223 thiL SO3465: nusB - N utilization substance protein B (NCBI ptt file), at 3,611,302 to 3,611,706 nusB SO3466: ribH - riboflavin synthase, beta subunit (NCBI ptt file), at 3,611,721 to 3,612,197 ribH
Locus Name Description Strand Phenotype
SO3456 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) - strong
SO_3457 SO_3457 hybrid sensory histidine kinase BarA (RefSeq) + strong
SO3458 SO3458 conserved hypothetical protein (NCBI ptt file) + strong
SO3459 SO3459 hypothetical protein (NCBI ptt file) + insig.
SO3460 SO3460 transcriptional regulator, LysR family (NCBI ptt file) - strong
SO3461 SO3461 Fatty acid transporter (from data) + strong
SO3462 recN DNA repair protein RecN (NCBI ptt file) + strong
SO3463 pgpA phosphatidylglycerophosphatase A (NCBI ptt file) - no data
SO3464 thiL thiamin-monophosphate kinase (NCBI ptt file) - no data
SO3465 nusB N utilization substance protein B (NCBI ptt file) - no data
SO3466 ribH riboflavin synthase, beta subunit (NCBI ptt file) - no data

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