Gene info for SO3427 in Shewanella oneidensis MR-1

Annotation: aspartokinase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 3,568,485 to 3,569,741
See nucleotide sequence around SO3427 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBS2

Nearby Genes

500 nttRNA-Arg-5 and tRNA-Arg-4 are separated by 83 nucleotidestRNA-Arg-4 and tRNA-Arg-3 are separated by 31 nucleotidestRNA-Arg-3 and tRNA-Ser-3 are separated by 20 nucleotidestRNA-Ser-3 and csrA are separated by 203 nucleotidescsrA and SO3427 are separated by 118 nucleotidesSO3427 and alaS are separated by 9 nucleotidesalaS and recX are separated by 278 nucleotidesrecX and recA are separated by 113 nucleotidesrecA and mutS are separated by 380 nucleotidesmutS and rpoS are separated by 82 nucleotides SO_t087: tRNA-Arg-5 - tRNA-Arg (RefSeq), at 3,567,509 to 3,567,585 tRNA-Arg-5 SO_t088: tRNA-Arg-4 - tRNA-Arg (RefSeq), at 3,567,669 to 3,567,745 tRNA-Arg-4 SO_t089: tRNA-Arg-3 - tRNA-Arg (RefSeq), at 3,567,777 to 3,567,853 tRNA-Arg-3 SO_t090: tRNA-Ser-3 - tRNA-Ser (RefSeq), at 3,567,874 to 3,567,965 tRNA-Ser-3 SO3426: csrA - carbon storage regulator (NCBI ptt file), at 3,568,169 to 3,568,366 csrA SO3427: SO3427 - aspartokinase (NCBI ptt file), at 3,568,485 to 3,569,741 SO3427 SO3428: alaS - alanyl-tRNA synthetase (NCBI ptt file), at 3,569,751 to 3,572,375 alaS SO3429: recX - regulatory protein RecX (NCBI ptt file), at 3,572,654 to 3,573,037 recX SO3430: recA - recA protein (NCBI ptt file), at 3,573,151 to 3,574,224 recA SO3431: mutS - DNA mismatch repair protein MutS (NCBI ptt file), at 3,574,605 to 3,577,175 mutS SO3432: rpoS - RNA polymerase sigma-38 factor (NCBI ptt file), at 3,577,258 to 3,578,238 rpoS
Locus Name Description Strand Phenotype
SO_t087 tRNA-Arg-5 tRNA-Arg (RefSeq) - no data
SO_t088 tRNA-Arg-4 tRNA-Arg (RefSeq) - no data
SO_t089 tRNA-Arg-3 tRNA-Arg (RefSeq) - no data
SO_t090 tRNA-Ser-3 tRNA-Ser (RefSeq) - no data
SO3426 csrA carbon storage regulator (NCBI ptt file) - no data
SO3427 SO3427 aspartokinase (NCBI ptt file) - no data
SO3428 alaS alanyl-tRNA synthetase (NCBI ptt file) - no data
SO3429 recX regulatory protein RecX (NCBI ptt file) - insig.
SO3430 recA recA protein (NCBI ptt file) - strong
SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) + sig.
SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) - sig.

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