Gene info for SO3423 in Shewanella oneidensis MR-1

Name: holC
Annotation: DNA polymerase III, chi subunit (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 3,563,011 to 3,563,475
See nucleotide sequence around SO3423 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBS6

Nearby Genes

500 ntSO3418 and trpR are separated by 32 nucleotidestrpR and SO3420 are separated by 189 nucleotidesSO3420 and SO3421 are separated by 82 nucleotidesSO3421 and yfiA-2 are separated by 300 nucleotidesyfiA-2 and holC are separated by 1076 nucleotidesholC and valS are separated by 15 nucleotidesvalS and tRNA-Arg-8 are separated by 601 nucleotidestRNA-Arg-8 and tRNA-Ser-4 are separated by 95 nucleotidestRNA-Ser-4 and tRNA-Arg-7 are separated by 36 nucleotidestRNA-Arg-7 and tRNA-Arg-6 are separated by 43 nucleotides SO3418: SO3418 - hypothetical protein (NCBI ptt file), at 3,559,178 to 3,559,555 SO3418 SO3419: trpR - trp operon repressor (NCBI ptt file), at 3,559,588 to 3,559,863 trpR SO3420: SO3420 - cytochrome c' (NCBI ptt file), at 3,560,053 to 3,560,502 SO3420 SO3421: SO3421 - b-type cytochrome, putative (NCBI ptt file), at 3,560,585 to 3,561,277 SO3421 SO3422: yfiA-2 - ribosomal subunit interface protein (NCBI ptt file), at 3,561,578 to 3,561,934 yfiA-2 SO3423: holC - DNA polymerase III, chi subunit (NCBI ptt file), at 3,563,011 to 3,563,475 holC SO3424: valS - valyl-tRNA synthetase (NCBI ptt file), at 3,563,491 to 3,566,367 valS SO_t083: tRNA-Arg-8 - tRNA-Arg (RefSeq), at 3,566,969 to 3,567,045 tRNA-Arg-8 SO_t084: tRNA-Ser-4 - tRNA-Ser (RefSeq), at 3,567,141 to 3,567,232 tRNA-Ser-4 SO_t085: tRNA-Arg-7 - tRNA-Arg (RefSeq), at 3,567,269 to 3,567,345 tRNA-Arg-7 SO_t086: tRNA-Arg-6 - tRNA-Arg (RefSeq), at 3,567,389 to 3,567,465 tRNA-Arg-6
Locus Name Description Strand Phenotype
SO3418 SO3418 hypothetical protein (NCBI ptt file) + insig.
SO3419 trpR trp operon repressor (NCBI ptt file) - sig.
SO3420 SO3420 cytochrome c' (NCBI ptt file) + insig.
SO3421 SO3421 b-type cytochrome, putative (NCBI ptt file) - insig.
SO3422 yfiA-2 ribosomal subunit interface protein (NCBI ptt file) + sig.
SO3423 holC DNA polymerase III, chi subunit (NCBI ptt file) + insig.
SO3424 valS valyl-tRNA synthetase (NCBI ptt file) + no data
SO_t083 tRNA-Arg-8 tRNA-Arg (RefSeq) - insig.
SO_t084 tRNA-Ser-4 tRNA-Ser (RefSeq) - no data
SO_t085 tRNA-Arg-7 tRNA-Arg (RefSeq) - no data
SO_t086 tRNA-Arg-6 tRNA-Arg (RefSeq) - no data

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