Gene info for SO3422 in Shewanella oneidensis MR-1

Name: yfiA-2
Annotation: ribosomal subunit interface protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 3,561,578 to 3,561,934
See nucleotide sequence around SO3422 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBS7

Nearby Genes

500 ntSO3417.1 and SO3418 are separated by 173 nucleotidesSO3418 and trpR are separated by 32 nucleotidestrpR and SO3420 are separated by 189 nucleotidesSO3420 and SO3421 are separated by 82 nucleotidesSO3421 and yfiA-2 are separated by 300 nucleotidesyfiA-2 and holC are separated by 1076 nucleotidesholC and valS are separated by 15 nucleotidesvalS and tRNA-Arg-8 are separated by 601 nucleotidestRNA-Arg-8 and tRNA-Ser-4 are separated by 95 nucleotidestRNA-Ser-4 and tRNA-Arg-7 are separated by 36 nucleotides SO3417.1: SO3417.1 - peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file), at 3,558,774 to 3,559,004 SO3417.1 SO3418: SO3418 - hypothetical protein (NCBI ptt file), at 3,559,178 to 3,559,555 SO3418 SO3419: trpR - trp operon repressor (NCBI ptt file), at 3,559,588 to 3,559,863 trpR SO3420: SO3420 - cytochrome c' (NCBI ptt file), at 3,560,053 to 3,560,502 SO3420 SO3421: SO3421 - b-type cytochrome, putative (NCBI ptt file), at 3,560,585 to 3,561,277 SO3421 SO3422: yfiA-2 - ribosomal subunit interface protein (NCBI ptt file), at 3,561,578 to 3,561,934 yfiA-2 SO3423: holC - DNA polymerase III, chi subunit (NCBI ptt file), at 3,563,011 to 3,563,475 holC SO3424: valS - valyl-tRNA synthetase (NCBI ptt file), at 3,563,491 to 3,566,367 valS SO_t083: tRNA-Arg-8 - tRNA-Arg (RefSeq), at 3,566,969 to 3,567,045 tRNA-Arg-8 SO_t084: tRNA-Ser-4 - tRNA-Ser (RefSeq), at 3,567,141 to 3,567,232 tRNA-Ser-4 SO_t085: tRNA-Arg-7 - tRNA-Arg (RefSeq), at 3,567,269 to 3,567,345 tRNA-Arg-7
Locus Name Description Strand Phenotype
SO3417.1 SO3417.1 peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file) + no data
SO3418 SO3418 hypothetical protein (NCBI ptt file) + insig.
SO3419 trpR trp operon repressor (NCBI ptt file) - sig.
SO3420 SO3420 cytochrome c' (NCBI ptt file) + insig.
SO3421 SO3421 b-type cytochrome, putative (NCBI ptt file) - insig.
SO3422 yfiA-2 ribosomal subunit interface protein (NCBI ptt file) + sig.
SO3423 holC DNA polymerase III, chi subunit (NCBI ptt file) + insig.
SO3424 valS valyl-tRNA synthetase (NCBI ptt file) + no data
SO_t083 tRNA-Arg-8 tRNA-Arg (RefSeq) - insig.
SO_t084 tRNA-Ser-4 tRNA-Ser (RefSeq) - no data
SO_t085 tRNA-Arg-7 tRNA-Arg (RefSeq) - no data

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