Gene info for SO3419 in Shewanella oneidensis MR-1

Name: trpR
Annotation: trp operon repressor (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 3,559,588 to 3,559,863
See nucleotide sequence around SO3419 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EBT0

Nearby Genes

500 ntthrB and thrA overlap by 4 nucleotidesthrA and slyD are separated by 641 nucleotidesslyD and SO3417.1 overlap by 212 nucleotidesSO3417.1 and SO3418 are separated by 173 nucleotidesSO3418 and trpR are separated by 32 nucleotidestrpR and SO3420 are separated by 189 nucleotidesSO3420 and SO3421 are separated by 82 nucleotidesSO3421 and yfiA-2 are separated by 300 nucleotidesyfiA-2 and holC are separated by 1076 nucleotidesholC and valS are separated by 15 nucleotides SO3414: thrB - homoserine kinase (NCBI ptt file), at 3,554,272 to 3,555,210 thrB SO3415: thrA - aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file), at 3,555,207 to 3,557,675 thrA SO3417: slyD - peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file), at 3,558,317 to 3,558,985 slyD SO3417.1: SO3417.1 - peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file), at 3,558,774 to 3,559,004 SO3417.1 SO3418: SO3418 - hypothetical protein (NCBI ptt file), at 3,559,178 to 3,559,555 SO3418 SO3419: trpR - trp operon repressor (NCBI ptt file), at 3,559,588 to 3,559,863 trpR SO3420: SO3420 - cytochrome c' (NCBI ptt file), at 3,560,053 to 3,560,502 SO3420 SO3421: SO3421 - b-type cytochrome, putative (NCBI ptt file), at 3,560,585 to 3,561,277 SO3421 SO3422: yfiA-2 - ribosomal subunit interface protein (NCBI ptt file), at 3,561,578 to 3,561,934 yfiA-2 SO3423: holC - DNA polymerase III, chi subunit (NCBI ptt file), at 3,563,011 to 3,563,475 holC SO3424: valS - valyl-tRNA synthetase (NCBI ptt file), at 3,563,491 to 3,566,367 valS
Locus Name Description Strand Phenotype
SO3414 thrB homoserine kinase (NCBI ptt file) - strong
SO3415 thrA aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file) - strong
SO3417 slyD peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file) + strong
SO3417.1 SO3417.1 peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file) + no data
SO3418 SO3418 hypothetical protein (NCBI ptt file) + insig.
SO3419 trpR trp operon repressor (NCBI ptt file) - sig.
SO3420 SO3420 cytochrome c' (NCBI ptt file) + insig.
SO3421 SO3421 b-type cytochrome, putative (NCBI ptt file) - insig.
SO3422 yfiA-2 ribosomal subunit interface protein (NCBI ptt file) + sig.
SO3423 holC DNA polymerase III, chi subunit (NCBI ptt file) + insig.
SO3424 valS valyl-tRNA synthetase (NCBI ptt file) + no data

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