Gene info for SO3338 in Shewanella oneidensis MR-1

Name: ybjU
Annotation: L-allo-threonine aldolase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 3,485,677 to 3,486,690
See nucleotide sequence around SO3338 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EC07

Nearby Genes

500 ntSO3333 and SO3334 overlap by 4 nucleotidesSO3334 and SO3335 are separated by 119 nucleotidesSO3335 and SO3336 are separated by 34 nucleotidesSO3336 and SO3337 are separated by 4 nucleotidesSO3337 and ybjU are separated by 233 nucleotidesybjU and SO3339 are separated by 285 nucleotidesSO3339 and SO3340 are separated by 31 nucleotidesSO3340 and SO3341 are separated by 111 nucleotidesSO3341 and SO3342 are separated by 36 nucleotidesSO3342 and SO3343 are separated by 352 nucleotides SO3333: SO3333 - transporter, putative (NCBI ptt file), at 3,479,321 to 3,480,766 SO3333 SO3334: SO3334 - GGDEF family protein (NCBI ptt file), at 3,480,763 to 3,482,487 SO3334 SO3335: SO3335 - conserved hypothetical protein (NCBI ptt file), at 3,482,607 to 3,483,431 SO3335 SO3336: SO3336 - hypothetical protein (NCBI ptt file), at 3,483,466 to 3,484,038 SO3336 SO3337: SO3337 - conserved domain protein (NCBI ptt file), at 3,484,043 to 3,485,443 SO3337 SO3338: ybjU - L-allo-threonine aldolase (NCBI ptt file), at 3,485,677 to 3,486,690 ybjU SO3339: SO3339 - OmpA family protein (NCBI ptt file), at 3,486,976 to 3,487,566 SO3339 SO3340: SO3340 - hypothetical Small-conductance mechanosensitive channel (NCBI ptt file), at 3,487,598 to 3,488,425 SO3340 SO3341: SO3341 - antioxidant, AhpC/TSA family (NCBI ptt file), at 3,488,537 to 3,489,130 SO3341 SO3342: SO3342 - putative transporter, required for L-alanine utilization (from data), at 3,489,167 to 3,489,808 SO3342 SO3343: SO3343 - conserved hypothetical protein (NCBI ptt file), at 3,490,161 to 3,490,721 SO3343
Locus Name Description Strand Phenotype
SO3333 SO3333 transporter, putative (NCBI ptt file) + insig.
SO3334 SO3334 GGDEF family protein (NCBI ptt file) + insig.
SO3335 SO3335 conserved hypothetical protein (NCBI ptt file) + insig.
SO3336 SO3336 hypothetical protein (NCBI ptt file) + insig.
SO3337 SO3337 conserved domain protein (NCBI ptt file) - insig.
SO3338 ybjU L-allo-threonine aldolase (NCBI ptt file) - insig.
SO3339 SO3339 OmpA family protein (NCBI ptt file) + insig.
SO3340 SO3340 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) + strong
SO3341 SO3341 antioxidant, AhpC/TSA family (NCBI ptt file) + insig.
SO3342 SO3342 putative transporter, required for L-alanine utilization (from data) - strong
SO3343 SO3343 conserved hypothetical protein (NCBI ptt file) - insig.

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