Gene info for SO3060 in Shewanella oneidensis MR-1

Annotation: outer membrane porin, putative (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 3,174,321 to 3,175,490
See nucleotide sequence around SO3060 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8ECS2

Nearby Genes

500 ntpip and SO3056 are separated by 219 nucleotidesSO3056 and SO3057 are separated by 41 nucleotidesSO3057 and SO3058 are separated by 98 nucleotidesSO3058 and SO3059 are separated by 165 nucleotidesSO3059 and SO3060 are separated by 85 nucleotidesSO3060 and topB are separated by 249 nucleotidestopB and SO3062 are separated by 199 nucleotidesSO3062 and SO3063 are separated by 293 nucleotidesSO3063 and purF are separated by 95 nucleotidespurF and SO3065 are separated by 182 nucleotides SO3055: pip - proline iminopeptidase (NCBI ptt file), at 3,167,398 to 3,168,672 pip SO3056: SO3056 - tetraheme cytochrome c (NCBI ptt file), at 3,168,892 to 3,169,275 SO3056 SO3057: SO3057 - Pal/histidase family protein (NCBI ptt file), at 3,169,317 to 3,170,891 SO3057 SO3058: SO3058 - flavocytochrome c flavin subunit, putative (NCBI ptt file), at 3,170,990 to 3,172,543 SO3058 SO3059: SO3059 - formate hydrogenlyase transcriptional activator, putative (NCBI ptt file), at 3,172,709 to 3,174,235 SO3059 SO3060: SO3060 - outer membrane porin, putative (NCBI ptt file), at 3,174,321 to 3,175,490 SO3060 SO3061: topB - DNA topoisomerase III (NCBI ptt file), at 3,175,740 to 3,177,848 topB SO3062: SO3062 - hypothetical protein (NCBI ptt file), at 3,178,048 to 3,178,335 SO3062 SO3063: SO3063 - sodium:alanine symporter family protein (NCBI ptt file), at 3,178,629 to 3,180,116 SO3063 SO3064: purF - amidophosphoribosyltransferase (NCBI ptt file), at 3,180,212 to 3,181,726 purF SO3065: SO3065 - colicin V production protein (NCBI ptt file), at 3,181,909 to 3,182,397 SO3065
Locus Name Description Strand Phenotype
SO3055 pip proline iminopeptidase (NCBI ptt file) + insig.
SO3056 SO3056 tetraheme cytochrome c (NCBI ptt file) - insig.
SO3057 SO3057 Pal/histidase family protein (NCBI ptt file) - insig.
SO3058 SO3058 flavocytochrome c flavin subunit, putative (NCBI ptt file) - insig.
SO3059 SO3059 formate hydrogenlyase transcriptional activator, putative (NCBI ptt file) + insig.
SO3060 SO3060 outer membrane porin, putative (NCBI ptt file) - insig.
SO3061 topB DNA topoisomerase III (NCBI ptt file) - insig.
SO3062 SO3062 hypothetical protein (NCBI ptt file) + sig.
SO3063 SO3063 sodium:alanine symporter family protein (NCBI ptt file) + insig.
SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) - strong
SO3065 SO3065 colicin V production protein (NCBI ptt file) - sig.

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