Gene info for SO2896 in Shewanella oneidensis MR-1

Name: ligA
Annotation: DNA ligase, NAD-dependent (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 3,017,751 to 3,019,820
See nucleotide sequence around SO2896 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8ED70

Nearby Genes

500 ntSO2890 and SO2891 are separated by 482 nucleotidesSO2891 and SO2893 are separated by 168 nucleotidesSO2893 and SO2894 are separated by 146 nucleotidesSO2894 and pdxH are separated by 26 nucleotidespdxH and ligA are separated by 181 nucleotidesligA and zipA are separated by 98 nucleotideszipA and SO2898 are separated by 26 nucleotidesSO2898 and cysZ are separated by 240 nucleotidescysZ and SO2900 are separated by 147 nucleotidesSO2900 and fabH-2 are separated by 158 nucleotides SO2890: SO2890 - hypothetical protein (NCBI ptt file), at 3,014,339 to 3,014,719 SO2890 SO2891: SO2891 - conserved hypothetical protein (NCBI ptt file), at 3,015,202 to 3,015,558 SO2891 SO2893: SO2893 - conserved hypothetical protein (NCBI ptt file), at 3,015,727 to 3,016,302 SO2893 SO2894: SO2894 - YaiI/YqxD family protein (NCBI ptt file), at 3,016,449 to 3,016,904 SO2894 SO2895: pdxH - pyridoxamine 5'-phosphate oxidase (NCBI ptt file), at 3,016,931 to 3,017,569 pdxH SO2896: ligA - DNA ligase, NAD-dependent (NCBI ptt file), at 3,017,751 to 3,019,820 ligA SO2897: zipA - cell division protein ZipA (NCBI ptt file), at 3,019,919 to 3,020,953 zipA SO2898: SO2898 - SMC family protein (NCBI ptt file), at 3,020,980 to 3,024,417 SO2898 SO2899: cysZ - cysZ protein (NCBI ptt file), at 3,024,658 to 3,025,437 cysZ SO2900: SO2900 - hypothetical protein (NCBI ptt file), at 3,025,585 to 3,027,966 SO2900 SO2901: fabH-2 - 3-oxoacyl-(acyl-carrier-protein) synthase III (NCBI ptt file), at 3,028,125 to 3,029,150 fabH-2
Locus Name Description Strand Phenotype
SO2890 SO2890 hypothetical protein (NCBI ptt file) - insig.
SO2891 SO2891 conserved hypothetical protein (NCBI ptt file) - insig.
SO2893 SO2893 conserved hypothetical protein (NCBI ptt file) - sig.
SO2894 SO2894 YaiI/YqxD family protein (NCBI ptt file) - insig.
SO2895 pdxH pyridoxamine 5'-phosphate oxidase (NCBI ptt file) - no data
SO2896 ligA DNA ligase, NAD-dependent (NCBI ptt file) - no data
SO2897 zipA cell division protein ZipA (NCBI ptt file) - no data
SO2898 SO2898 SMC family protein (NCBI ptt file) - strong
SO2899 cysZ cysZ protein (NCBI ptt file) + strong
SO2900 SO2900 hypothetical protein (NCBI ptt file) + insig.
SO2901 fabH-2 3-oxoacyl-(acyl-carrier-protein) synthase III (NCBI ptt file) - sig.

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