Gene info for SO2884 in Shewanella oneidensis MR-1

Updated annotation (from data): ycgB component of nitrogen-related signalling system (of yeaGH-ycgB)
Rationale: conserved cofitness; yeaG is a protein kinase
Original annotation: conserved hypothetical protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 3,005,583 to 3,007,109
See nucleotide sequence around SO2884 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8ED81

Nearby Genes

500 nturaA and SO2880 are separated by 132 nucleotidesSO2880 and SodB are separated by 226 nucleotidesSodB and SO2882 are separated by 249 nucleotidesSO2882 and SO2883 are separated by 65 nucleotidesSO2883 and SO2884 are separated by 9 nucleotidesSO2884 and fadR are separated by 346 nucleotidesfadR and nhaB are separated by 302 nucleotidesnhaB and dsbB are separated by 97 nucleotidesdsbB and SO2888 are separated by 23 nucleotidesSO2888 and SO2889 are separated by 320 nucleotides SO2879: uraA - uracil permease (NCBI ptt file), at 2,999,541 to 3,000,779 uraA SO2880: SO2880 - glutaredoxin domain protein (NCBI ptt file), at 3,000,912 to 3,001,244 SO2880 SO2881: SodB - superoxide dismutase, Fe (NCBI ptt file), at 3,001,471 to 3,002,055 SodB SO2882: SO2882 - yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data), at 3,002,305 to 3,004,239 SO2882 SO2883: SO2883 - yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data), at 3,004,305 to 3,005,573 SO2883 SO2884: SO2884 - ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data), at 3,005,583 to 3,007,109 SO2884 SO2885: fadR - fatty acid metabolism regulator protein (NCBI ptt file), at 3,007,456 to 3,008,178 fadR SO2886: nhaB - Na+/H+ antiporter (NCBI ptt file), at 3,008,481 to 3,010,082 nhaB SO2887: dsbB - disulfide bond formation protein b (NCBI ptt file), at 3,010,180 to 3,010,707 dsbB SO2888: SO2888 - hypothetical protein (NCBI ptt file), at 3,010,731 to 3,011,000 SO2888 SO2889: SO2889 - sensory box histidine kinase (NCBI ptt file), at 3,011,321 to 3,013,930 SO2889
Locus Name Description Strand Phenotype
SO2879 uraA uracil permease (NCBI ptt file) + strong
SO2880 SO2880 glutaredoxin domain protein (NCBI ptt file) - no data
SO2881 SodB superoxide dismutase, Fe (NCBI ptt file) + no data
SO2882 SO2882 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) + strong
SO2883 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) + strong
SO2884 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) + strong
SO2885 fadR fatty acid metabolism regulator protein (NCBI ptt file) - no data
SO2886 nhaB Na+/H+ antiporter (NCBI ptt file) + strong
SO2887 dsbB disulfide bond formation protein b (NCBI ptt file) + strong
SO2888 SO2888 hypothetical protein (NCBI ptt file) - insig.
SO2889 SO2889 sensory box histidine kinase (NCBI ptt file) + insig.

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