Gene info for SO2633 in Shewanella oneidensis MR-1

Name: trmU
Annotation: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 2,768,717 to 2,769,835
See nucleotide sequence around SO2633 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8CX40

Nearby Genes

500 ntcspD and icd are separated by 219 nucleotidesicd and SO_2630 are separated by 341 nucleotidesSO_2630 and SO2631 are separated by 56 nucleotidesSO2631 and SO2632 are separated by 5 nucleotidesSO2632 and trmU are separated by 15 nucleotidestrmU and SO2634 are separated by 3 nucleotidesSO2634 and purB are separated by 29 nucleotidespurB and SO2636 are separated by 126 nucleotidesSO2636 and SO2637 are separated by 126 nucleotidesSO2637 and ldh are separated by 280 nucleotides SO2628: cspD - stress response protein CspD (NCBI ptt file), at 2,764,097 to 2,764,303 cspD SO2629: icd - isocitrate dehydrogenase, NADP-dependent (NCBI ptt file), at 2,764,523 to 2,766,748 icd SO_2630: SO_2630 - no description, at 2,767,090 to 2,767,887 _2630 SO2631: SO2631 - MutT/nudix family protein (NCBI ptt file), at 2,767,944 to 2,768,420 SO2631 SO2632: SO2632 - hypothetical protein (NCBI ptt file), at 2,768,426 to 2,768,701 SO2632 SO2633: trmU - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file), at 2,768,717 to 2,769,835 trmU SO2634: SO2634 - conserved hypothetical protein (NCBI ptt file), at 2,769,839 to 2,770,456 SO2634 SO2635: purB - adenylosuccinate lyase (NCBI ptt file), at 2,770,486 to 2,771,856 purB SO2636: SO2636 - conserved hypothetical protein (NCBI ptt file), at 2,771,983 to 2,773,125 SO2636 SO2637: SO2637 - hypothetical protein (NCBI ptt file), at 2,773,252 to 2,773,704 SO2637 SO2638: ldh - leucine dehydrogenase (NCBI ptt file), at 2,773,985 to 2,775,019 ldh
Locus Name Description Strand Phenotype
SO2628 cspD stress response protein CspD (NCBI ptt file) + strong
SO2629 icd isocitrate dehydrogenase, NADP-dependent (NCBI ptt file) - strong
SO_2630 SO_2630 no description + insig.
SO2631 SO2631 MutT/nudix family protein (NCBI ptt file) + insig.
SO2632 SO2632 hypothetical protein (NCBI ptt file) - no data
SO2633 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) + no data
SO2634 SO2634 conserved hypothetical protein (NCBI ptt file) + strong
SO2635 purB adenylosuccinate lyase (NCBI ptt file) + no data
SO2636 SO2636 conserved hypothetical protein (NCBI ptt file) + insig.
SO2637 SO2637 hypothetical protein (NCBI ptt file) - sig.
SO2638 ldh leucine dehydrogenase (NCBI ptt file) + strong

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