Gene info for SO2629 in Shewanella oneidensis MR-1

Name: icd
Annotation: isocitrate dehydrogenase, NADP-dependent (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 2,764,523 to 2,766,748
See nucleotide sequence around SO2629 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EDW2

Nearby Genes

500 ntSO2624 and infA are separated by 82 nucleotidesinfA and clpA are separated by 107 nucleotidesclpA and SO2627 are separated by 42 nucleotidesSO2627 and cspD are separated by 193 nucleotidescspD and icd are separated by 219 nucleotidesicd and SO_2630 are separated by 341 nucleotidesSO_2630 and SO2631 are separated by 56 nucleotidesSO2631 and SO2632 are separated by 5 nucleotidesSO2632 and trmU are separated by 15 nucleotidestrmU and SO2634 are separated by 3 nucleotides SO2624: SO2624 - hypothetical arginyl-tRNA:protein arginylyltransferase (NCBI ptt file), at 2,760,160 to 2,760,876 SO2624 SO2625: infA - translation initiation factor IF-1 (NCBI ptt file), at 2,760,959 to 2,761,177 infA SO2626: clpA - ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file), at 2,761,285 to 2,763,552 clpA SO2627: SO2627 - conserved hypothetical protein (NCBI ptt file), at 2,763,595 to 2,763,903 SO2627 SO2628: cspD - stress response protein CspD (NCBI ptt file), at 2,764,097 to 2,764,303 cspD SO2629: icd - isocitrate dehydrogenase, NADP-dependent (NCBI ptt file), at 2,764,523 to 2,766,748 icd SO_2630: SO_2630 - no description, at 2,767,090 to 2,767,887 _2630 SO2631: SO2631 - MutT/nudix family protein (NCBI ptt file), at 2,767,944 to 2,768,420 SO2631 SO2632: SO2632 - hypothetical protein (NCBI ptt file), at 2,768,426 to 2,768,701 SO2632 SO2633: trmU - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file), at 2,768,717 to 2,769,835 trmU SO2634: SO2634 - conserved hypothetical protein (NCBI ptt file), at 2,769,839 to 2,770,456 SO2634
Locus Name Description Strand Phenotype
SO2624 SO2624 hypothetical arginyl-tRNA:protein arginylyltransferase (NCBI ptt file) + insig.
SO2625 infA translation initiation factor IF-1 (NCBI ptt file) + no data
SO2626 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) - strong
SO2627 SO2627 conserved hypothetical protein (NCBI ptt file) - cofit
SO2628 cspD stress response protein CspD (NCBI ptt file) + strong
SO2629 icd isocitrate dehydrogenase, NADP-dependent (NCBI ptt file) - strong
SO_2630 SO_2630 no description + insig.
SO2631 SO2631 MutT/nudix family protein (NCBI ptt file) + insig.
SO2632 SO2632 hypothetical protein (NCBI ptt file) - no data
SO2633 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) + no data
SO2634 SO2634 conserved hypothetical protein (NCBI ptt file) + strong

Or browse nearby genes

Or see the comparative fitness browser