Gene info for SO2615 in Shewanella oneidensis MR-1

Name: pabC
Annotation: 4-amino-4-deoxychorismate lyase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 2,751,361 to 2,752,170
See nucleotide sequence around SO2615 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EDX6

Nearby Genes

500 ntSO2610 and pilZ are separated by 326 nucleotidespilZ and holB are separated by 6 nucleotidesholB and tmk overlap by 7 nucleotidestmk and SO2614 overlap by 4 nucleotidesSO2614 and pabC overlap by 4 nucleotidespabC and dcd are separated by 5 nucleotidesdcd and udk are separated by 29 nucleotidesudk and SO2618 are separated by 11 nucleotidesSO2618 and metG are separated by 160 nucleotidesmetG and SO2620 are separated by 198 nucleotides SO2610: SO2610 - hydrolase, TatD family (NCBI ptt file), at 2,747,330 to 2,748,118 SO2610 SO2611: pilZ - type IV pilus biogenesis protein pilZ (NCBI ptt file), at 2,748,445 to 2,748,771 pilZ SO2612: holB - DNA polymerase III, delta prime subunit (NCBI ptt file), at 2,748,778 to 2,749,734 holB SO2613: tmk - thymidylate kinase (NCBI ptt file), at 2,749,728 to 2,750,357 tmk SO2614: SO2614 - conserved hypothetical protein TIGR00247 (NCBI ptt file), at 2,750,354 to 2,751,364 SO2614 SO2615: pabC - 4-amino-4-deoxychorismate lyase (NCBI ptt file), at 2,751,361 to 2,752,170 pabC SO2616: dcd - deoxycytidine triphosphate deaminase (NCBI ptt file), at 2,752,176 to 2,752,757 dcd SO2617: udk - uridine kinase (NCBI ptt file), at 2,752,787 to 2,753,425 udk SO2618: SO2618 - ATP-binding protein, Mrp/Nbp35 family (NCBI ptt file), at 2,753,437 to 2,754,552 SO2618 SO2619: metG - methionyl-tRNA synthetase (NCBI ptt file), at 2,754,713 to 2,756,743 metG SO2620: SO2620 - conserved hypothetical protein (NCBI ptt file), at 2,756,942 to 2,757,898 SO2620
Locus Name Description Strand Phenotype
SO2610 SO2610 hydrolase, TatD family (NCBI ptt file) - insig.
SO2611 pilZ type IV pilus biogenesis protein pilZ (NCBI ptt file) - insig.
SO2612 holB DNA polymerase III, delta prime subunit (NCBI ptt file) - no data
SO2613 tmk thymidylate kinase (NCBI ptt file) - no data
SO2614 SO2614 conserved hypothetical protein TIGR00247 (NCBI ptt file) - strong
SO2615 pabC 4-amino-4-deoxychorismate lyase (NCBI ptt file) - strong
SO2616 dcd deoxycytidine triphosphate deaminase (NCBI ptt file) - strong
SO2617 udk uridine kinase (NCBI ptt file) - insig.
SO2618 SO2618 ATP-binding protein, Mrp/Nbp35 family (NCBI ptt file) - strong
SO2619 metG methionyl-tRNA synthetase (NCBI ptt file) + no data
SO2620 SO2620 conserved hypothetical protein (NCBI ptt file) + strong

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