Gene info for SO2612 in Shewanella oneidensis MR-1

Name: holB
Annotation: DNA polymerase III, delta prime subunit (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 2,748,778 to 2,749,734
See nucleotide sequence around SO2612 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EDX9

Nearby Genes

500 ntSO2606 and SO2607 are separated by 143 nucleotidesSO2607 and SO2609 are separated by 182 nucleotidesSO2609 and SO2610 are separated by 230 nucleotidesSO2610 and pilZ are separated by 326 nucleotidespilZ and holB are separated by 6 nucleotidesholB and tmk overlap by 7 nucleotidestmk and SO2614 overlap by 4 nucleotidesSO2614 and pabC overlap by 4 nucleotidespabC and dcd are separated by 5 nucleotidesdcd and udk are separated by 29 nucleotides SO2606: SO2606 - PqiB family protein (NCBI ptt file), at 2,741,513 to 2,744,122 SO2606 SO2607: SO2607 - spore maturation protein A-related protein (NCBI ptt file), at 2,744,266 to 2,745,492 SO2607 SO2609: SO2609 - NOL1/NOP2/sun family protein (NCBI ptt file), at 2,745,675 to 2,747,099 SO2609 SO2610: SO2610 - hydrolase, TatD family (NCBI ptt file), at 2,747,330 to 2,748,118 SO2610 SO2611: pilZ - type IV pilus biogenesis protein pilZ (NCBI ptt file), at 2,748,445 to 2,748,771 pilZ SO2612: holB - DNA polymerase III, delta prime subunit (NCBI ptt file), at 2,748,778 to 2,749,734 holB SO2613: tmk - thymidylate kinase (NCBI ptt file), at 2,749,728 to 2,750,357 tmk SO2614: SO2614 - conserved hypothetical protein TIGR00247 (NCBI ptt file), at 2,750,354 to 2,751,364 SO2614 SO2615: pabC - 4-amino-4-deoxychorismate lyase (NCBI ptt file), at 2,751,361 to 2,752,170 pabC SO2616: dcd - deoxycytidine triphosphate deaminase (NCBI ptt file), at 2,752,176 to 2,752,757 dcd SO2617: udk - uridine kinase (NCBI ptt file), at 2,752,787 to 2,753,425 udk
Locus Name Description Strand Phenotype
SO2606 SO2606 PqiB family protein (NCBI ptt file) + strong
SO2607 SO2607 spore maturation protein A-related protein (NCBI ptt file) - insig.
SO2609 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) + insig.
SO2610 SO2610 hydrolase, TatD family (NCBI ptt file) - insig.
SO2611 pilZ type IV pilus biogenesis protein pilZ (NCBI ptt file) - insig.
SO2612 holB DNA polymerase III, delta prime subunit (NCBI ptt file) - no data
SO2613 tmk thymidylate kinase (NCBI ptt file) - no data
SO2614 SO2614 conserved hypothetical protein TIGR00247 (NCBI ptt file) - strong
SO2615 pabC 4-amino-4-deoxychorismate lyase (NCBI ptt file) - strong
SO2616 dcd deoxycytidine triphosphate deaminase (NCBI ptt file) - strong
SO2617 udk uridine kinase (NCBI ptt file) - insig.

Or browse nearby genes

Or see the comparative fitness browser