Gene info for SO2560 in Shewanella oneidensis MR-1

Name: rnhA
Annotation: ribonuclease HI (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 2,690,175 to 2,690,651
See nucleotide sequence around SO2560 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EE30

Nearby Genes

500 ntSO2555.1 and tRNA-Asp-4 are separated by 285 nucleotidestRNA-Asp-4 and tRNA-Asp-3 are separated by 57 nucleotidestRNA-Asp-3 and SO2557 are separated by 167 nucleotidesSO2557 and dnaQ-2 are separated by 76 nucleotidesdnaQ-2 and rnhA are separated by 70 nucleotidesrnhA and SO2561 are separated by 28 nucleotidesSO2561 and SO2562 are separated by 23 nucleotidesSO2562 and SO2563 are separated by 160 nucleotidesSO2563 and SO2564 are separated by 250 nucleotidesSO2564 and SO2565 are separated by 367 nucleotides SO2555.1: SO2555.1 - outer membrane protein OmpA weak homolog (NCBI ptt file), at 2,687,047 to 2,687,196 SO2555.1 SO_t053: tRNA-Asp-4 - tRNA-Asp (RefSeq), at 2,687,482 to 2,687,558 tRNA-Asp-4 SO_t054: tRNA-Asp-3 - tRNA-Asp (RefSeq), at 2,687,616 to 2,687,692 tRNA-Asp-3 SO2557: SO2557 - conserved hypothetical protein (NCBI ptt file), at 2,687,860 to 2,689,299 SO2557 SO2559: dnaQ-2 - DNA polymerase III, epsilon subunit (NCBI ptt file), at 2,689,376 to 2,690,104 dnaQ-2 SO2560: rnhA - ribonuclease HI (NCBI ptt file), at 2,690,175 to 2,690,651 rnhA SO2561: SO2561 - transcriptional regulator, LysR family (NCBI ptt file), at 2,690,680 to 2,691,579 SO2561 SO2562: SO2562 - conserved hypothetical protein (NCBI ptt file), at 2,691,603 to 2,692,337 SO2562 SO2563: SO2563 - metallo-beta-lactamase family protein (NCBI ptt file), at 2,692,498 to 2,693,301 SO2563 SO2564: SO2564 - transglycosylase, Slt family (NCBI ptt file), at 2,693,552 to 2,695,099 SO2564 SO2565: SO2565 - intracellular proteinase inhibitor domain protein (NCBI ptt file), at 2,695,467 to 2,696,114 SO2565
Locus Name Description Strand Phenotype
SO2555.1 SO2555.1 outer membrane protein OmpA weak homolog (NCBI ptt file) + no data
SO_t053 tRNA-Asp-4 tRNA-Asp (RefSeq) - no data
SO_t054 tRNA-Asp-3 tRNA-Asp (RefSeq) - no data
SO2557 SO2557 conserved hypothetical protein (NCBI ptt file) - strong
SO2559 dnaQ-2 DNA polymerase III, epsilon subunit (NCBI ptt file) - no data
SO2560 rnhA ribonuclease HI (NCBI ptt file) + no data
SO2561 SO2561 transcriptional regulator, LysR family (NCBI ptt file) - insig.
SO2562 SO2562 conserved hypothetical protein (NCBI ptt file) - strong
SO2563 SO2563 metallo-beta-lactamase family protein (NCBI ptt file) + sig.
SO2564 SO2564 transglycosylase, Slt family (NCBI ptt file) + strong
SO2565 SO2565 intracellular proteinase inhibitor domain protein (NCBI ptt file) - insig.

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