Gene info for SO2434 in Shewanella oneidensis MR-1

Annotation: extracellular solute-binding proteins, family 3/GGDEF domain protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 2,543,523 to 2,546,336
See nucleotide sequence around SO2434 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EEE8

Nearby Genes

500 ntruvB and ruvA are separated by 85 nucleotidesruvA and ruvC overlap by 4 nucleotidesruvC and SO2432 are separated by 188 nucleotidesSO2432 and aspS are separated by 216 nucleotidesaspS and SO2434 are separated by 184 nucleotidesSO2434 and SO2435 are separated by 150 nucleotidesSO2435 and SO2436 overlap by 4 nucleotidesSO2436 and SO2437 are separated by 63 nucleotidesSO2437 and SO2438 are separated by 229 nucleotidesSO2438 and SO2439 are separated by 135 nucleotides SO2429: ruvB - Holliday junction DNA helicase RuvB (NCBI ptt file), at 2,538,186 to 2,539,190 ruvB SO2430: ruvA - Holliday junction DNA helicase RuvA (NCBI ptt file), at 2,539,276 to 2,539,893 ruvA SO2431: ruvC - crossover junction endodeoxyribonuclease RuvC (NCBI ptt file), at 2,539,890 to 2,540,411 ruvC SO2432: SO2432 - conserved hypothetical protein TIGR01033 (NCBI ptt file), at 2,540,600 to 2,541,346 SO2432 SO2433: aspS - aspartyl-tRNA synthetase (NCBI ptt file), at 2,541,563 to 2,543,338 aspS SO2434: SO2434 - extracellular solute-binding proteins, family 3/GGDEF domain protein (NCBI ptt file), at 2,543,523 to 2,546,336 SO2434 SO2435: SO2435 - methyltransferase, putative (NCBI ptt file), at 2,546,487 to 2,547,218 SO2435 SO2436: SO2436 - methyltransferase, putative (NCBI ptt file), at 2,547,215 to 2,548,207 SO2436 SO2437: SO2437 - hypothetical protein (NCBI ptt file), at 2,548,271 to 2,550,166 SO2437 SO2438: SO2438 - transcriptional regulator, LysR family (NCBI ptt file), at 2,550,396 to 2,551,304 SO2438 SO2439: SO2439 - srpA-related protein (NCBI ptt file), at 2,551,440 to 2,553,590 SO2439
Locus Name Description Strand Phenotype
SO2429 ruvB Holliday junction DNA helicase RuvB (NCBI ptt file) - strong
SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) - sig.
SO2431 ruvC crossover junction endodeoxyribonuclease RuvC (NCBI ptt file) - insig.
SO2432 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) - strong
SO2433 aspS aspartyl-tRNA synthetase (NCBI ptt file) - no data
SO2434 SO2434 extracellular solute-binding proteins, family 3/GGDEF domain protein (NCBI ptt file) - insig.
SO2435 SO2435 methyltransferase, putative (NCBI ptt file) + strong
SO2436 SO2436 methyltransferase, putative (NCBI ptt file) + strong
SO2437 SO2437 hypothetical protein (NCBI ptt file) + strong
SO2438 SO2438 transcriptional regulator, LysR family (NCBI ptt file) + sig.
SO2439 SO2439 srpA-related protein (NCBI ptt file) - insig.

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