Gene info for SO2427 in Shewanella oneidensis MR-1

Annotation: TonB-dependent receptor, putative (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 2,534,781 to 2,537,342
See nucleotide sequence around SO2427 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EEF5

Nearby Genes

500 ntansA and SO2422 are separated by 70 nucleotidesSO2422 and SO2423 overlap by 4 nucleotidesSO2423 and SO2424 are separated by 8 nucleotidesSO2424 and SO2426 are separated by 181 nucleotidesSO2426 and SO2427 are separated by 167 nucleotidesSO2427 and ruvB are separated by 843 nucleotidesruvB and ruvA are separated by 85 nucleotidesruvA and ruvC overlap by 4 nucleotidesruvC and SO2432 are separated by 188 nucleotidesSO2432 and aspS are separated by 216 nucleotides SO2421: ansA - L-asparaginase I (NCBI ptt file), at 2,530,903 to 2,531,916 ansA SO2422: SO2422 - conserved hypothetical protein (NCBI ptt file), at 2,531,987 to 2,532,268 SO2422 SO2423: SO2423 - hypothetical protein (NCBI ptt file), at 2,532,265 to 2,532,582 SO2423 SO2424: SO2424 - zinc carboxypeptidase domain protein (NCBI ptt file), at 2,532,591 to 2,533,718 SO2424 SO2426: SO2426 - DNA-binding response regulator (NCBI ptt file), at 2,533,900 to 2,534,613 SO2426 SO2427: SO2427 - TonB-dependent receptor, putative (NCBI ptt file), at 2,534,781 to 2,537,342 SO2427 SO2429: ruvB - Holliday junction DNA helicase RuvB (NCBI ptt file), at 2,538,186 to 2,539,190 ruvB SO2430: ruvA - Holliday junction DNA helicase RuvA (NCBI ptt file), at 2,539,276 to 2,539,893 ruvA SO2431: ruvC - crossover junction endodeoxyribonuclease RuvC (NCBI ptt file), at 2,539,890 to 2,540,411 ruvC SO2432: SO2432 - conserved hypothetical protein TIGR01033 (NCBI ptt file), at 2,540,600 to 2,541,346 SO2432 SO2433: aspS - aspartyl-tRNA synthetase (NCBI ptt file), at 2,541,563 to 2,543,338 aspS
Locus Name Description Strand Phenotype
SO2421 ansA L-asparaginase I (NCBI ptt file) + strong
SO2422 SO2422 conserved hypothetical protein (NCBI ptt file) - sig.
SO2423 SO2423 hypothetical protein (NCBI ptt file) - insig.
SO2424 SO2424 zinc carboxypeptidase domain protein (NCBI ptt file) - sig.
SO2426 SO2426 DNA-binding response regulator (NCBI ptt file) - strong
SO2427 SO2427 TonB-dependent receptor, putative (NCBI ptt file) - strong
SO2429 ruvB Holliday junction DNA helicase RuvB (NCBI ptt file) - strong
SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) - sig.
SO2431 ruvC crossover junction endodeoxyribonuclease RuvC (NCBI ptt file) - insig.
SO2432 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) - strong
SO2433 aspS aspartyl-tRNA synthetase (NCBI ptt file) - no data

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