Gene info for SO2406 in Shewanella oneidensis MR-1

Name: aspC-2
Annotation: aspartate aminotransferase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 2,509,451 to 2,510,641
See nucleotide sequence around SO2406 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EEH6

Nearby Genes

500 ntSO2400 and ihfB are separated by 122 nucleotidesihfB and rpsA are separated by 72 nucleotidesrpsA and cmk are separated by 102 nucleotidescmk and aroA are separated by 183 nucleotidesaroA and aspC-2 are separated by 434 nucleotidesaspC-2 and SO2407 are separated by 401 nucleotidesSO2407 and SO2408 are separated by 22 nucleotidesSO2408 and SO2409 overlap by 4 nucleotidesSO2409 and serC are separated by 273 nucleotidesserC and gyrA are separated by 99 nucleotides SO2400: SO2400 - conserved hypothetical protein (NCBI ptt file), at 2,504,332 to 2,504,607 SO2400 SO2401: ihfB - integration host factor, beta subunit (NCBI ptt file), at 2,504,730 to 2,505,017 ihfB SO2402: rpsA - ribosomal protein S1 (NCBI ptt file), at 2,505,090 to 2,506,757 rpsA SO2403: cmk - cytidylate kinase (NCBI ptt file), at 2,506,860 to 2,507,552 cmk SO2404: aroA - 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file), at 2,507,736 to 2,509,016 aroA SO2406: aspC-2 - aspartate aminotransferase (NCBI ptt file), at 2,509,451 to 2,510,641 aspC-2 SO2407: SO2407 - conserved hypothetical protein (NCBI ptt file), at 2,511,043 to 2,512,602 SO2407 SO2408: SO2408 - radical activating enzyme (NCBI ptt file), at 2,512,625 to 2,513,485 SO2408 SO2409: SO2409 - transcriptional regulator, LysR family (NCBI ptt file), at 2,513,482 to 2,514,402 SO2409 SO2410: serC - phosphoserine aminotransferase (NCBI ptt file), at 2,514,676 to 2,515,779 serC SO2411: gyrA - DNA gyrase, A subunit (NCBI ptt file), at 2,515,879 to 2,518,638 gyrA
Locus Name Description Strand Phenotype
SO2400 SO2400 conserved hypothetical protein (NCBI ptt file) - no data
SO2401 ihfB integration host factor, beta subunit (NCBI ptt file) - no data
SO2402 rpsA ribosomal protein S1 (NCBI ptt file) - no data
SO2403 cmk cytidylate kinase (NCBI ptt file) - no data
SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) - strong
SO2406 aspC-2 aspartate aminotransferase (NCBI ptt file) + strong
SO2407 SO2407 conserved hypothetical protein (NCBI ptt file) + insig.
SO2408 SO2408 radical activating enzyme (NCBI ptt file) + insig.
SO2409 SO2409 transcriptional regulator, LysR family (NCBI ptt file) - insig.
SO2410 serC phosphoserine aminotransferase (NCBI ptt file) - no data
SO2411 gyrA DNA gyrase, A subunit (NCBI ptt file) - no data

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