Gene info for SO2395 in Shewanella oneidensis MR-1

Updated annotation (from data): Acyl-CoA dehydrogenase (EC 1.3.8.7)
Rationale: Specific phenotype: utilization of Tween 20. Not sure about preferred substrate length
Original annotation: acyl-CoA dehydrogenase family protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 2,498,972 to 2,500,729
See nucleotide sequence around SO2395 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EEI7

Nearby Genes

500 ntpssA and SO2391 are separated by 11 nucleotidesSO2391 and SO2392 are separated by 203 nucleotidesSO2392 and SO2393 are separated by 251 nucleotidesSO2393 and dacB are separated by 25 nucleotidesdacB and SO2395 are separated by 60 nucleotidesSO2395 and SO2396 are separated by 221 nucleotidesSO2396 and SO2397 are separated by 45 nucleotidesSO2397 and pyrF are separated by 65 nucleotidespyrF and SO2399 are separated by 42 nucleotidesSO2399 and SO2400 are separated by 1 nucleotides SO2390: pssA - CDP-diacylglycerol--serine O-phosphatidyltransferase (NCBI ptt file), at 2,493,871 to 2,495,184 pssA SO2391: SO2391 - conserved hypothetical protein (NCBI ptt file), at 2,495,196 to 2,495,528 SO2391 SO2392: SO2392 - ISSod4, transposase (NCBI ptt file), at 2,495,732 to 2,496,934 SO2392 SO2393: SO2393 - hypothetical protein (NCBI ptt file), at 2,497,186 to 2,497,362 SO2393 SO2394: dacB - penicillin-binding protein 4 (NCBI ptt file), at 2,497,388 to 2,498,911 dacB SO2395: SO2395 - Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data), at 2,498,972 to 2,500,729 SO2395 SO2396: SO2396 - conserved hypothetical protein (NCBI ptt file), at 2,500,951 to 2,501,493 SO2396 SO2397: SO2397 - oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file), at 2,501,539 to 2,502,366 SO2397 SO2398: pyrF - orotidine 5`-phosphate decarboxylase (NCBI ptt file), at 2,502,432 to 2,503,127 pyrF SO2399: SO2399 - conserved hypothetical protein (NCBI ptt file), at 2,503,170 to 2,504,330 SO2399 SO2400: SO2400 - conserved hypothetical protein (NCBI ptt file), at 2,504,332 to 2,504,607 SO2400
Locus Name Description Strand Phenotype
SO2390 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase (NCBI ptt file) - no data
SO2391 SO2391 conserved hypothetical protein (NCBI ptt file) - no data
SO2392 SO2392 ISSod4, transposase (NCBI ptt file) - no data
SO2393 SO2393 hypothetical protein (NCBI ptt file) + insig.
SO2394 dacB penicillin-binding protein 4 (NCBI ptt file) + insig.
SO2395 SO2395 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) - sig.
SO2396 SO2396 conserved hypothetical protein (NCBI ptt file) - insig.
SO2397 SO2397 oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) - insig.
SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) - strong
SO2399 SO2399 conserved hypothetical protein (NCBI ptt file) - no data
SO2400 SO2400 conserved hypothetical protein (NCBI ptt file) - no data

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