Gene info for SO2344 in Shewanella oneidensis MR-1

Annotation: ISSod4, transposase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 2,451,506 to 2,452,708
See nucleotide sequence around SO2344 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 ntastE and SO2339 are separated by 162 nucleotidesSO2339 and SO2340 are separated by 3 nucleotidesSO2340 and SO2341 are separated by 9 nucleotidesSO2341 and nadA are separated by 134 nucleotidesnadA and SO2344 are separated by 149 nucleotidesSO2344 and gapA-2 are separated by 85 nucleotidesgapA-2 and SO2346 are separated by 224 nucleotidesSO2346 and gapA-3 are separated by 205 nucleotidesgapA-3 and tRNA-Gly-7 are separated by 296 nucleotidestRNA-Gly-7 and tRNA-Cys-2 are separated by 20 nucleotides SO2338: astE - succinylglutamate desuccinylase (NCBI ptt file), at 2,445,175 to 2,446,209 astE SO2339: SO2339 - alpha keto acid dehydrogenase complex, E1 component, alpha subunit (NCBI ptt file), at 2,446,372 to 2,447,550 SO2339 SO2340: SO2340 - alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file), at 2,447,554 to 2,448,531 SO2340 SO2341: SO2341 - alpha keto acid dehydrogenase complex, E2 component (NCBI ptt file), at 2,448,541 to 2,450,148 SO2341 SO2342: nadA - quinolinate synthetase complex, subunit A (NCBI ptt file), at 2,450,283 to 2,451,356 nadA SO2344: SO2344 - ISSod4, transposase (NCBI ptt file), at 2,451,506 to 2,452,708 SO2344 SO2345: gapA-2 - glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file), at 2,452,794 to 2,453,804 gapA-2 SO2346: SO2346 - conserved hypothetical protein (NCBI ptt file), at 2,454,029 to 2,454,907 SO2346 SO2347: gapA-3 - glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file), at 2,455,113 to 2,456,546 gapA-3 SO_t041: tRNA-Gly-7 - tRNA-Gly (RefSeq), at 2,456,843 to 2,456,918 tRNA-Gly-7 SO_t042: tRNA-Cys-2 - tRNA-Cys (RefSeq), at 2,456,939 to 2,457,012 tRNA-Cys-2
Locus Name Description Strand Phenotype
SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) + strong
SO2339 SO2339 alpha keto acid dehydrogenase complex, E1 component, alpha subunit (NCBI ptt file) + strong
SO2340 SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) + strong
SO2341 SO2341 alpha keto acid dehydrogenase complex, E2 component (NCBI ptt file) + strong
SO2342 nadA quinolinate synthetase complex, subunit A (NCBI ptt file) + strong
SO2344 SO2344 ISSod4, transposase (NCBI ptt file) + no data
SO2345 gapA-2 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) - no data
SO2346 SO2346 conserved hypothetical protein (NCBI ptt file) - sig.
SO2347 gapA-3 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) + strong
SO_t041 tRNA-Gly-7 tRNA-Gly (RefSeq) + no data
SO_t042 tRNA-Cys-2 tRNA-Cys (RefSeq) + no data

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