Gene info for SO2053 in Shewanella oneidensis MR-1

Annotation: transcriptional regulator, LysR family (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 2,152,753 to 2,153,628
See nucleotide sequence around SO2053 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EFC8

Nearby Genes

500 ntSO2047 and SO2048 are separated by 245 nucleotidesSO2048 and SO2049 are separated by 225 nucleotidesSO2049 and SO2050 are separated by 167 nucleotidesSO2050 and SO2052 are separated by 315 nucleotidesSO2052 and SO2053 are separated by 79 nucleotidesSO2053 and adhC are separated by 231 nucleotidesadhC and SO2055 are separated by 138 nucleotidesSO2055 and SO2056 are separated by 100 nucleotidesSO2056 and SO2057 are separated by 59 nucleotidesSO2057 and SO2058 are separated by 41 nucleotides SO2047: SO2047 - prolyl oligopeptidase family protein (NCBI ptt file), at 2,145,107 to 2,147,200 SO2047 SO2048: SO2048 - membrane protein, putative (NCBI ptt file), at 2,147,446 to 2,149,071 SO2048 SO2049: SO2049 - GGDEF family protein (NCBI ptt file), at 2,149,297 to 2,150,256 SO2049 SO2050: SO2050 - conserved hypothetical protein (NCBI ptt file), at 2,150,424 to 2,151,068 SO2050 SO2052: SO2052 - hypothetical oxidoreductase (NCBI ptt file), at 2,151,384 to 2,152,673 SO2052 SO2053: SO2053 - transcriptional regulator, LysR family (NCBI ptt file), at 2,152,753 to 2,153,628 SO2053 SO2054: adhC - alcohol dehydrogenase class III (NCBI ptt file), at 2,153,860 to 2,154,999 adhC SO2055: SO2055 - esterase, putative (NCBI ptt file), at 2,155,138 to 2,155,977 SO2055 SO2056: SO2056 - ISSod1, transposase OrfB (NCBI ptt file), at 2,156,078 to 2,156,887 SO2056 SO2057: SO2057 - ISSod1, transposase OrfA (NCBI ptt file), at 2,156,947 to 2,157,237 SO2057 SO2058: SO2058 - hypothetical protein (NCBI ptt file), at 2,157,279 to 2,157,416 SO2058
Locus Name Description Strand Phenotype
SO2047 SO2047 prolyl oligopeptidase family protein (NCBI ptt file) + insig.
SO2048 SO2048 membrane protein, putative (NCBI ptt file) + strong
SO2049 SO2049 GGDEF family protein (NCBI ptt file) + insig.
SO2050 SO2050 conserved hypothetical protein (NCBI ptt file) - insig.
SO2052 SO2052 hypothetical oxidoreductase (NCBI ptt file) + insig.
SO2053 SO2053 transcriptional regulator, LysR family (NCBI ptt file) - insig.
SO2054 adhC alcohol dehydrogenase class III (NCBI ptt file) + insig.
SO2055 SO2055 esterase, putative (NCBI ptt file) + insig.
SO2056 SO2056 ISSod1, transposase OrfB (NCBI ptt file) - no data
SO2057 SO2057 ISSod1, transposase OrfA (NCBI ptt file) - no data
SO2058 SO2058 hypothetical protein (NCBI ptt file) + no data

Or browse nearby genes

Or see the comparative fitness browser