Gene info for SO2049 in Shewanella oneidensis MR-1

Annotation: GGDEF family protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 2,149,297 to 2,150,256
See nucleotide sequence around SO2049 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EFD2

Nearby Genes

500 ntgloA and SO2045 are separated by 629 nucleotidesSO2045 and SO2046 overlap by 1 nucleotidesSO2046 and SO2047 are separated by 226 nucleotidesSO2047 and SO2048 are separated by 245 nucleotidesSO2048 and SO2049 are separated by 225 nucleotidesSO2049 and SO2050 are separated by 167 nucleotidesSO2050 and SO2052 are separated by 315 nucleotidesSO2052 and SO2053 are separated by 79 nucleotidesSO2053 and adhC are separated by 231 nucleotidesadhC and SO2055 are separated by 138 nucleotides SO2044: gloA - lactoylglutathione lyase (NCBI ptt file), at 2,142,195 to 2,142,605 gloA SO2045: SO2045 - cation efflux family protein (NCBI ptt file), at 2,143,235 to 2,144,419 SO2045 SO2046: SO2046 - transcriptional regulator, MarR family (NCBI ptt file), at 2,144,419 to 2,144,880 SO2046 SO2047: SO2047 - prolyl oligopeptidase family protein (NCBI ptt file), at 2,145,107 to 2,147,200 SO2047 SO2048: SO2048 - membrane protein, putative (NCBI ptt file), at 2,147,446 to 2,149,071 SO2048 SO2049: SO2049 - GGDEF family protein (NCBI ptt file), at 2,149,297 to 2,150,256 SO2049 SO2050: SO2050 - conserved hypothetical protein (NCBI ptt file), at 2,150,424 to 2,151,068 SO2050 SO2052: SO2052 - hypothetical oxidoreductase (NCBI ptt file), at 2,151,384 to 2,152,673 SO2052 SO2053: SO2053 - transcriptional regulator, LysR family (NCBI ptt file), at 2,152,753 to 2,153,628 SO2053 SO2054: adhC - alcohol dehydrogenase class III (NCBI ptt file), at 2,153,860 to 2,154,999 adhC SO2055: SO2055 - esterase, putative (NCBI ptt file), at 2,155,138 to 2,155,977 SO2055
Locus Name Description Strand Phenotype
SO2044 gloA lactoylglutathione lyase (NCBI ptt file) - strong
SO2045 SO2045 cation efflux family protein (NCBI ptt file) + strong
SO2046 SO2046 transcriptional regulator, MarR family (NCBI ptt file) + strong
SO2047 SO2047 prolyl oligopeptidase family protein (NCBI ptt file) + insig.
SO2048 SO2048 membrane protein, putative (NCBI ptt file) + strong
SO2049 SO2049 GGDEF family protein (NCBI ptt file) + insig.
SO2050 SO2050 conserved hypothetical protein (NCBI ptt file) - insig.
SO2052 SO2052 hypothetical oxidoreductase (NCBI ptt file) + insig.
SO2053 SO2053 transcriptional regulator, LysR family (NCBI ptt file) - insig.
SO2054 adhC alcohol dehydrogenase class III (NCBI ptt file) + insig.
SO2055 SO2055 esterase, putative (NCBI ptt file) + insig.

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