Gene info for SO1860 in Shewanella oneidensis MR-1

Annotation: DNA-binding response regulator, LuxR family (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 1,951,805 to 1,952,449
See nucleotide sequence around SO1860 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EFV5

Nearby Genes

500 ntfabA and SO1857 are separated by 73 nucleotidesSO1857 and tRNA-Ser-2 are separated by 221 nucleotidestRNA-Ser-2 and SO1858 are separated by 27 nucleotidesSO1858 and tRNA-Ser-1 are separated by 357 nucleotidestRNA-Ser-1 and SO1860 are separated by 601 nucleotidesSO1860 and uvrC are separated by 106 nucleotidesuvrC and pgsA are separated by 47 nucleotidespgsA and tRNA-Gly-5 are separated by 143 nucleotidestRNA-Gly-5 and tRNA-Cys-1 are separated by 21 nucleotidestRNA-Cys-1 and tRNA-Leu-2 are separated by 48 nucleotides SO1856: fabA - 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase (NCBI ptt file), at 1,947,497 to 1,948,012 fabA SO1857: SO1857 - hypothetical ATP-dependent protease (NCBI ptt file), at 1,948,086 to 1,949,819 SO1857 SO_t031: tRNA-Ser-2 - tRNA-Ser (RefSeq), at 1,950,041 to 1,950,131 tRNA-Ser-2 SO1858: SO1858 - hypothetical protein (NCBI ptt file), at 1,950,159 to 1,950,755 SO1858 SO_t032: tRNA-Ser-1 - tRNA-Ser (RefSeq), at 1,951,113 to 1,951,203 tRNA-Ser-1 SO1860: SO1860 - DNA-binding response regulator, LuxR family (NCBI ptt file), at 1,951,805 to 1,952,449 SO1860 SO1861: uvrC - excinuclease ABC, C subunit (NCBI ptt file), at 1,952,556 to 1,954,385 uvrC SO1862: pgsA - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (NCBI ptt file), at 1,954,433 to 1,954,981 pgsA SO_t033: tRNA-Gly-5 - tRNA-Gly (RefSeq), at 1,955,125 to 1,955,200 tRNA-Gly-5 SO_t034: tRNA-Cys-1 - tRNA-Cys (RefSeq), at 1,955,222 to 1,955,295 tRNA-Cys-1 SO_t035: tRNA-Leu-2 - tRNA-Leu (RefSeq), at 1,955,344 to 1,955,430 tRNA-Leu-2
Locus Name Description Strand Phenotype
SO1856 fabA 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase (NCBI ptt file) - no data
SO1857 SO1857 hypothetical ATP-dependent protease (NCBI ptt file) - strong
SO_t031 tRNA-Ser-2 tRNA-Ser (RefSeq) + no data
SO1858 SO1858 hypothetical protein (NCBI ptt file) + sig.
SO_t032 tRNA-Ser-1 tRNA-Ser (RefSeq) + no data
SO1860 SO1860 DNA-binding response regulator, LuxR family (NCBI ptt file) + strong
SO1861 uvrC excinuclease ABC, C subunit (NCBI ptt file) + strong
SO1862 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (NCBI ptt file) + no data
SO_t033 tRNA-Gly-5 tRNA-Gly (RefSeq) + no data
SO_t034 tRNA-Cys-1 tRNA-Cys (RefSeq) + no data
SO_t035 tRNA-Leu-2 tRNA-Leu (RefSeq) + no data

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