Gene info for SO1795 in Shewanella oneidensis MR-1

Name: clpX
Annotation: ATP-dependent Clp protease, ATP-binding subunit ClpX (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 1,882,709 to 1,883,989
See nucleotide sequence around SO1795 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EG18

Nearby Genes

500 nttRNA-Pro-1 and tRNA-Arg-1 are separated by 90 nucleotidestRNA-Arg-1 and tRNA-His-1 are separated by 9 nucleotidestRNA-His-1 and tig are separated by 261 nucleotidestig and clpP are separated by 89 nucleotidesclpP and clpX are separated by 99 nucleotidesclpX and lon are separated by 132 nucleotideslon and SO1797 are separated by 259 nucleotidesSO1797 and ppiD are separated by 226 nucleotidesppiD and SO_1799 are separated by 169 nucleotidesSO_1799 and SO1800 are separated by 385 nucleotides SO_t024: tRNA-Pro-1 - tRNA-Pro (RefSeq), at 1,880,017 to 1,880,093 tRNA-Pro-1 SO_t025: tRNA-Arg-1 - tRNA-Arg (RefSeq), at 1,880,184 to 1,880,260 tRNA-Arg-1 SO_t026: tRNA-His-1 - tRNA-His (RefSeq), at 1,880,270 to 1,880,345 tRNA-His-1 SO1793: tig - trigger factor (NCBI ptt file), at 1,880,607 to 1,881,911 tig SO1794: clpP - ATP-dependent Clp protease, proteolytic subunit (NCBI ptt file), at 1,882,001 to 1,882,609 clpP SO1795: clpX - ATP-dependent Clp protease, ATP-binding subunit ClpX (NCBI ptt file), at 1,882,709 to 1,883,989 clpX SO1796: lon - ATP-dependent protease La (NCBI ptt file), at 1,884,122 to 1,886,479 lon SO1797: SO1797 - DNA-binding protein, HU family (NCBI ptt file), at 1,886,739 to 1,887,011 SO1797 SO1798: ppiD - peptidyl-prolyl cis-trans isomerase D (NCBI ptt file), at 1,887,238 to 1,889,103 ppiD SO_1799: SO_1799 - no description, at 1,889,273 to 1,889,485 _1799 SO1800: SO1800 - conserved hypothetical protein (NCBI ptt file), at 1,889,871 to 1,891,073 SO1800
Locus Name Description Strand Phenotype
SO_t024 tRNA-Pro-1 tRNA-Pro (RefSeq) + no data
SO_t025 tRNA-Arg-1 tRNA-Arg (RefSeq) + no data
SO_t026 tRNA-His-1 tRNA-His (RefSeq) + no data
SO1793 tig trigger factor (NCBI ptt file) + strong
SO1794 clpP ATP-dependent Clp protease, proteolytic subunit (NCBI ptt file) + strong
SO1795 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX (NCBI ptt file) + strong
SO1796 lon ATP-dependent protease La (NCBI ptt file) + strong
SO1797 SO1797 DNA-binding protein, HU family (NCBI ptt file) + no data
SO1798 ppiD peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) + strong
SO_1799 SO_1799 no description - insig.
SO1800 SO1800 conserved hypothetical protein (NCBI ptt file) - no data

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