Gene info for SO1625 in Shewanella oneidensis MR-1

Name: dapD
Annotation: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 1,706,796 to 1,707,620
See nucleotide sequence around SO1625 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EGH9

Nearby Genes

500 ntSO1619 and SO_1620 overlap by 14 nucleotidesSO_1620 and SO1622 are separated by 386 nucleotidesSO1622 and ptsG overlap by 49 nucleotidesptsG and purU are separated by 154 nucleotidespurU and dapD are separated by 210 nucleotidesdapD and glnD are separated by 18 nucleotidesglnD and map are separated by 82 nucleotidesmap and rpsB are separated by 309 nucleotidesrpsB and tsf are separated by 119 nucleotidestsf and pyrH are separated by 70 nucleotides SO1619: SO1619 - conserved hypothetical protein (NCBI ptt file), at 1,702,167 to 1,702,490 SO1619 SO_1620: SO_1620 - no description, at 1,702,477 to 1,703,313 _1620 SO1622: SO1622 - hypothetical flavodoxin (NCBI ptt file), at 1,703,700 to 1,704,164 SO1622 SO1623: ptsG - PTS system, glucose-specific IIBC component (NCBI ptt file), at 1,704,116 to 1,705,615 ptsG SO1624: purU - formyltetrahydrofolate deformylase (NCBI ptt file), at 1,705,770 to 1,706,585 purU SO1625: dapD - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (NCBI ptt file), at 1,706,796 to 1,707,620 dapD SO1626: glnD - protein-P-II uridylyltransferase (NCBI ptt file), at 1,707,639 to 1,710,224 glnD SO1627: map - methionine aminopeptidase, type I (NCBI ptt file), at 1,710,307 to 1,711,104 map SO1629: rpsB - ribosomal protein S2 (NCBI ptt file), at 1,711,414 to 1,712,142 rpsB SO1630: tsf - translation elongation factor Ts (NCBI ptt file), at 1,712,262 to 1,713,113 tsf SO1631: pyrH - uridylate kinase (NCBI ptt file), at 1,713,184 to 1,713,912 pyrH
Locus Name Description Strand Phenotype
SO1619 SO1619 conserved hypothetical protein (NCBI ptt file) + sig.
SO_1620 SO_1620 no description + insig.
SO1622 SO1622 hypothetical flavodoxin (NCBI ptt file) + cofit
SO1623 ptsG PTS system, glucose-specific IIBC component (NCBI ptt file) + insig.
SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) + insig.
SO1625 dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (NCBI ptt file) - no data
SO1626 glnD protein-P-II uridylyltransferase (NCBI ptt file) - strong
SO1627 map methionine aminopeptidase, type I (NCBI ptt file) - no data
SO1629 rpsB ribosomal protein S2 (NCBI ptt file) + no data
SO1630 tsf translation elongation factor Ts (NCBI ptt file) + no data
SO1631 pyrH uridylate kinase (NCBI ptt file) + no data

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