Gene info for SO1319 in Shewanella oneidensis MR-1

Updated annotation (from data): putative transporter, required for glycine utilization
Rationale: PFam PF03458.9 (UPF0126). conserved specific phenotype of UPF0126
Original annotation: conserved hypothetical protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 1,373,879 to 1,374,505
See nucleotide sequence around SO1319 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EHB0

Nearby Genes

500 ntSO1313 and SO1314 are separated by 20 nucleotidesSO1314 and tyrS are separated by 74 nucleotidestyrS and SO1317 are separated by 438 nucleotidesSO1317 and SO1318 are separated by 123 nucleotidesSO1318 and SO1319 are separated by 1 nucleotidesSO1319 and SO1320 overlap by 4 nucleotidesSO1320 and SO1321 are separated by 43 nucleotidesSO1321 and pfs are separated by 31 nucleotidespfs and SO1323 overlap by 2 nucleotidesSO1323 and gltD are separated by 62 nucleotides SO1313: SO1313 - conserved hypothetical protein (NCBI ptt file), at 1,368,546 to 1,369,655 SO1313 SO1314: SO1314 - peptidase, M23/M37 family (NCBI ptt file), at 1,369,676 to 1,371,124 SO1314 SO1315: tyrS - tyrosyl-tRNA synthetase (NCBI ptt file), at 1,371,199 to 1,372,395 tyrS SO1317: SO1317 - hypothetical protein (NCBI ptt file), at 1,372,834 to 1,373,262 SO1317 SO1318: SO1318 - hypothetical protein (NCBI ptt file), at 1,373,386 to 1,373,877 SO1318 SO1319: SO1319 - putative transporter, required for glycine utilization (from data), at 1,373,879 to 1,374,505 SO1319 SO1320: SO1320 - hypothetical protein (NCBI ptt file), at 1,374,502 to 1,374,891 SO1320 SO1321: SO1321 - CobD-related protein (NCBI ptt file), at 1,374,935 to 1,375,924 SO1321 SO1322: pfs - 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase (NCBI ptt file), at 1,375,956 to 1,376,666 pfs SO1323: SO1323 - hypothetical protein (NCBI ptt file), at 1,376,665 to 1,376,871 SO1323 SO1324: gltD - glutamate synthase, small subunit (NCBI ptt file), at 1,376,934 to 1,378,340 gltD
Locus Name Description Strand Phenotype
SO1313 SO1313 conserved hypothetical protein (NCBI ptt file) - strong
SO1314 SO1314 peptidase, M23/M37 family (NCBI ptt file) - insig.
SO1315 tyrS tyrosyl-tRNA synthetase (NCBI ptt file) + no data
SO1317 SO1317 hypothetical protein (NCBI ptt file) - insig.
SO1318 SO1318 hypothetical protein (NCBI ptt file) - insig.
SO1319 SO1319 putative transporter, required for glycine utilization (from data) - strong
SO1320 SO1320 hypothetical protein (NCBI ptt file) - strong
SO1321 SO1321 CobD-related protein (NCBI ptt file) - sig.
SO1322 pfs 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase (NCBI ptt file) - no data
SO1323 SO1323 hypothetical protein (NCBI ptt file) + insig.
SO1324 gltD glutamate synthase, small subunit (NCBI ptt file) - strong

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