Gene info for SO1268 in Shewanella oneidensis MR-1

Updated annotation (from data): Glutamate--putrescine ligase (EC 6.3.1.11)
Rationale: Specifically important for utilizing Putrescine Dihydrochloride. Automated validation from mutant phenotype: the predicted function (RXN0-3901) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: glutamine synthetase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 1,315,127 to 1,316,482
See nucleotide sequence around SO1268 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EHF4

Nearby Genes

500 ntSO1262 and SO1263 are separated by 76 nucleotidesSO1263 and SO1264 are separated by 175 nucleotidesSO1264 and SO1265 are separated by 234 nucleotidesSO1265 and SO1267 are separated by 385 nucleotidesSO1267 and SO1268 are separated by 1 nucleotidesSO1268 and SO1269 are separated by 112 nucleotidesSO1269 and SO1270 are separated by 607 nucleotidesSO1270 and SO1271 are separated by 159 nucleotidesSO1271 and SO1272 overlap by 4 nucleotidesSO1272 and SO1273 overlap by 4 nucleotides SO1262: SO1262 - hypothetical protein (NCBI ptt file), at 1,311,028 to 1,311,540 SO1262 SO1263: SO1263 - hypothetical protein (NCBI ptt file), at 1,311,617 to 1,311,712 SO1263 SO1264: SO1264 - hypothetical oxidoreductase (NCBI ptt file), at 1,311,888 to 1,313,195 SO1264 SO1265: SO1265 - transcriptional regulator, putative (NCBI ptt file), at 1,313,430 to 1,313,978 SO1265 SO1267: SO1267 - Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data), at 1,314,364 to 1,315,125 SO1267 SO1268: SO1268 - Glutamate--putrescine ligase (EC 6.3.1.11) (from data), at 1,315,127 to 1,316,482 SO1268 SO1269: SO1269 - ISSod4, transposase (NCBI ptt file), at 1,316,595 to 1,317,797 SO1269 SO1270: SO1270 - polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file), at 1,318,405 to 1,319,508 SO1270 SO1271: SO1271 - polyamine ABC transporter, ATP-binding protein (NCBI ptt file), at 1,319,668 to 1,320,804 SO1271 SO1272: SO1272 - polyamine ABC transporter, permease protein (NCBI ptt file), at 1,320,801 to 1,321,706 SO1272 SO1273: SO1273 - polyamine ABC transporter, permease protein (NCBI ptt file), at 1,321,703 to 1,322,518 SO1273
Locus Name Description Strand Phenotype
SO1262 SO1262 hypothetical protein (NCBI ptt file) + insig.
SO1263 SO1263 hypothetical protein (NCBI ptt file) - no data
SO1264 SO1264 hypothetical oxidoreductase (NCBI ptt file) - insig.
SO1265 SO1265 transcriptional regulator, putative (NCBI ptt file) + strong
SO1267 SO1267 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) + strong
SO1268 SO1268 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) + strong
SO1269 SO1269 ISSod4, transposase (NCBI ptt file) + no data
SO1270 SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) + strong
SO1271 SO1271 polyamine ABC transporter, ATP-binding protein (NCBI ptt file) + strong
SO1272 SO1272 polyamine ABC transporter, permease protein (NCBI ptt file) + strong
SO1273 SO1273 polyamine ABC transporter, permease protein (NCBI ptt file) + strong

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