Gene info for SO1062 in Shewanella oneidensis MR-1

Name: def-2
Annotation: polypeptide deformylase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 1,102,263 to 1,102,808
See nucleotide sequence around SO1062 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EHZ2

Nearby Genes

500 ntSO1055 and SO1056 are separated by 68 nucleotidesSO1056 and SO1059 are separated by 492 nucleotidesSO1059 and SO1060 are separated by 239 nucleotidesSO1060 and SO1061 are separated by 67 nucleotidesSO1061 and def-2 overlap by 4 nucleotidesdef-2 and slyX are separated by 57 nucleotidesslyX and SO1064 are separated by 9 nucleotidesSO1064 and fkpA are separated by 153 nucleotidesfkpA and SO1066 are separated by 563 nucleotidesSO1066 and SO1067 are separated by 133 nucleotides SO1055: SO1055 - sensory box protein (NCBI ptt file), at 1,093,490 to 1,094,878 SO1055 SO1056: SO1056 - methyl-accepting chemotaxis protein (NCBI ptt file), at 1,094,947 to 1,096,839 SO1056 SO1059: SO1059 - aminopeptidase N (NCBI ptt file), at 1,097,332 to 1,099,965 SO1059 SO1060: SO1060 - conserved hypothetical protein (NCBI ptt file), at 1,100,205 to 1,100,798 SO1060 SO1061: SO1061 - TPR domain protein (NCBI ptt file), at 1,100,866 to 1,102,266 SO1061 SO1062: def-2 - polypeptide deformylase (NCBI ptt file), at 1,102,263 to 1,102,808 def-2 SO1063: slyX - slyX protein (NCBI ptt file), at 1,102,866 to 1,103,078 slyX SO1064: SO1064 - hypothetical WD domain protein (NCBI ptt file), at 1,103,088 to 1,104,038 SO1064 SO1065: fkpA - FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (NCBI ptt file), at 1,104,192 to 1,104,959 fkpA SO1066: SO1066 - extracellular nuclease (NCBI ptt file), at 1,105,523 to 1,108,138 SO1066 SO1067: SO1067 - hypothetical protein (NCBI ptt file), at 1,108,272 to 1,108,727 SO1067
Locus Name Description Strand Phenotype
SO1055 SO1055 sensory box protein (NCBI ptt file) + insig.
SO1056 SO1056 methyl-accepting chemotaxis protein (NCBI ptt file) - insig.
SO1059 SO1059 aminopeptidase N (NCBI ptt file) - strong
SO1060 SO1060 conserved hypothetical protein (NCBI ptt file) - no data
SO1061 SO1061 TPR domain protein (NCBI ptt file) - strong
SO1062 def-2 polypeptide deformylase (NCBI ptt file) - insig.
SO1063 slyX slyX protein (NCBI ptt file) - insig.
SO1064 SO1064 hypothetical WD domain protein (NCBI ptt file) - insig.
SO1065 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (NCBI ptt file) + strong
SO1066 SO1066 extracellular nuclease (NCBI ptt file) + insig.
SO1067 SO1067 hypothetical protein (NCBI ptt file) + insig.

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