Gene info for SO0947 in Shewanella oneidensis MR-1

Name: srmB
Annotation: ATP-dependent RNA helicase SrmB (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 982,197 to 983,459
See nucleotide sequence around SO0947 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EI96

Nearby Genes

500 ntSO0942 and SO0943 overlap by 20 nucleotidesSO0943 and SO0944 are separated by 164 nucleotidesSO0944 and SO0945 are separated by 85 nucleotidesSO0945 and SO0946 overlap by 1 nucleotidesSO0946 and srmB are separated by 633 nucleotidessrmB and SO0948 are separated by 278 nucleotidesSO0948 and brnQ are separated by 611 nucleotidesbrnQ and xerD are separated by 80 nucleotidesxerD and dsbC are separated by 150 nucleotidesdsbC and recJ are separated by 92 nucleotides SO0942: SO0942 - conserved hypothetical protein (NCBI ptt file), at 972,576 to 973,976 SO0942 SO0943: SO0943 - sensory box protein, putative (NCBI ptt file), at 973,957 to 976,194 SO0943 SO0944: SO0944 - conserved hypothetical protein (NCBI ptt file), at 976,359 to 977,147 SO0944 SO0945: SO0945 - AcrB/AcrD/AcrF family protein (NCBI ptt file), at 977,233 to 980,436 SO0945 SO0946: SO0946 - conserved hypothetical protein (NCBI ptt file), at 980,436 to 981,563 SO0946 SO0947: srmB - ATP-dependent RNA helicase SrmB (NCBI ptt file), at 982,197 to 983,459 srmB SO0948: SO0948 - conserved hypothetical protein (NCBI ptt file), at 983,738 to 984,400 SO0948 SO0949: brnQ - branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file), at 985,012 to 986,400 brnQ SO0950: xerD - integrase/recombinase XerD (NCBI ptt file), at 986,481 to 987,383 xerD SO0951: dsbC - thiol:disulfide interchange protein DsbC (NCBI ptt file), at 987,534 to 988,259 dsbC SO0952: recJ - single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file), at 988,352 to 990,076 recJ
Locus Name Description Strand Phenotype
SO0942 SO0942 conserved hypothetical protein (NCBI ptt file) + strong
SO0943 SO0943 sensory box protein, putative (NCBI ptt file) - strong
SO0944 SO0944 conserved hypothetical protein (NCBI ptt file) - insig.
SO0945 SO0945 AcrB/AcrD/AcrF family protein (NCBI ptt file) - insig.
SO0946 SO0946 conserved hypothetical protein (NCBI ptt file) - insig.
SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) - strong
SO0948 SO0948 conserved hypothetical protein (NCBI ptt file) - insig.
SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) + strong
SO0950 xerD integrase/recombinase XerD (NCBI ptt file) + strong
SO0951 dsbC thiol:disulfide interchange protein DsbC (NCBI ptt file) + strong
SO0952 recJ single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) + strong

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