Gene info for SO0945 in Shewanella oneidensis MR-1

Annotation: AcrB/AcrD/AcrF family protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 977,233 to 980,436
See nucleotide sequence around SO0945 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EI98

Nearby Genes

500 ntSO0940 and SO0941 overlap by 8 nucleotidesSO0941 and SO0942 are separated by 84 nucleotidesSO0942 and SO0943 overlap by 20 nucleotidesSO0943 and SO0944 are separated by 164 nucleotidesSO0944 and SO0945 are separated by 85 nucleotidesSO0945 and SO0946 overlap by 1 nucleotidesSO0946 and srmB are separated by 633 nucleotidessrmB and SO0948 are separated by 278 nucleotidesSO0948 and brnQ are separated by 611 nucleotidesbrnQ and xerD are separated by 80 nucleotides SO0940: SO0940 - transcriptional regulator-related protein (NCBI ptt file), at 971,225 to 971,968 SO0940 SO0941: SO0941 - hypothetical protein (NCBI ptt file), at 971,961 to 972,491 SO0941 SO0942: SO0942 - conserved hypothetical protein (NCBI ptt file), at 972,576 to 973,976 SO0942 SO0943: SO0943 - sensory box protein, putative (NCBI ptt file), at 973,957 to 976,194 SO0943 SO0944: SO0944 - conserved hypothetical protein (NCBI ptt file), at 976,359 to 977,147 SO0944 SO0945: SO0945 - AcrB/AcrD/AcrF family protein (NCBI ptt file), at 977,233 to 980,436 SO0945 SO0946: SO0946 - conserved hypothetical protein (NCBI ptt file), at 980,436 to 981,563 SO0946 SO0947: srmB - ATP-dependent RNA helicase SrmB (NCBI ptt file), at 982,197 to 983,459 srmB SO0948: SO0948 - conserved hypothetical protein (NCBI ptt file), at 983,738 to 984,400 SO0948 SO0949: brnQ - branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file), at 985,012 to 986,400 brnQ SO0950: xerD - integrase/recombinase XerD (NCBI ptt file), at 986,481 to 987,383 xerD
Locus Name Description Strand Phenotype
SO0940 SO0940 transcriptional regulator-related protein (NCBI ptt file) + sig.
SO0941 SO0941 hypothetical protein (NCBI ptt file) + insig.
SO0942 SO0942 conserved hypothetical protein (NCBI ptt file) + strong
SO0943 SO0943 sensory box protein, putative (NCBI ptt file) - strong
SO0944 SO0944 conserved hypothetical protein (NCBI ptt file) - insig.
SO0945 SO0945 AcrB/AcrD/AcrF family protein (NCBI ptt file) - insig.
SO0946 SO0946 conserved hypothetical protein (NCBI ptt file) - insig.
SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) - strong
SO0948 SO0948 conserved hypothetical protein (NCBI ptt file) - insig.
SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) + strong
SO0950 xerD integrase/recombinase XerD (NCBI ptt file) + strong

Or browse nearby genes

Or see the comparative fitness browser