Gene info for SO0928 in Shewanella oneidensis MR-1

Annotation: GGDEF domain protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 956,612 to 957,565
See nucleotide sequence around SO0928 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EIB5

Nearby Genes

500 ntSO0923 and SO0924 are separated by 70 nucleotidesSO0924 and SO0925 are separated by 15 nucleotidesSO0925 and SO0926 are separated by 81 nucleotidesSO0926 and SO0927 are separated by 187 nucleotidesSO0927 and SO0928 are separated by 374 nucleotidesSO0928 and metK are separated by 421 nucleotidesmetK and tkt are separated by 477 nucleotidestkt and epd are separated by 128 nucleotidesepd and pgk are separated by 133 nucleotidespgk and fba are separated by 187 nucleotides SO0923: SO0923 - conserved hypothetical protein (NCBI ptt file), at 953,269 to 953,685 SO0923 SO0924: SO0924 - hypothetical protein (NCBI ptt file), at 953,756 to 953,989 SO0924 SO0925: SO0925 - GGDEF domain protein (NCBI ptt file), at 954,005 to 955,012 SO0925 SO0926: SO0926 - acetyltransferase, GNAT family (NCBI ptt file), at 955,094 to 955,708 SO0926 SO0927: SO0927 - hypothetical protein (NCBI ptt file), at 955,896 to 956,237 SO0927 SO0928: SO0928 - GGDEF domain protein (NCBI ptt file), at 956,612 to 957,565 SO0928 SO0929: metK - S-adenosylmethionine synthetase (NCBI ptt file), at 957,987 to 959,138 metK SO0930: tkt - transketolase (NCBI ptt file), at 959,616 to 961,610 tkt SO0931: epd - D-erythrose-4-phosphate dehydrogenase (NCBI ptt file), at 961,739 to 962,755 epd SO0932: pgk - phosphoglycerate kinase (NCBI ptt file), at 962,889 to 964,064 pgk SO0933: fba - fructose-bisphosphate aldolase, class II, Calvin cycle subtype (NCBI ptt file), at 964,252 to 965,319 fba
Locus Name Description Strand Phenotype
SO0923 SO0923 conserved hypothetical protein (NCBI ptt file) - insig.
SO0924 SO0924 hypothetical protein (NCBI ptt file) + sig.
SO0925 SO0925 GGDEF domain protein (NCBI ptt file) - insig.
SO0926 SO0926 acetyltransferase, GNAT family (NCBI ptt file) + sig.
SO0927 SO0927 hypothetical protein (NCBI ptt file) + insig.
SO0928 SO0928 GGDEF domain protein (NCBI ptt file) + insig.
SO0929 metK S-adenosylmethionine synthetase (NCBI ptt file) - no data
SO0930 tkt transketolase (NCBI ptt file) + no data
SO0931 epd D-erythrose-4-phosphate dehydrogenase (NCBI ptt file) + strong
SO0932 pgk phosphoglycerate kinase (NCBI ptt file) + no data
SO0933 fba fructose-bisphosphate aldolase, class II, Calvin cycle subtype (NCBI ptt file) + no data

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