Gene info for SO0622 in Shewanella oneidensis MR-1

Annotation: DNA-binding response regulator (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, - strand, nucleotides 649,660 to 650,334
See nucleotide sequence around SO0622 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI, uniprot: Q8EJ51

Nearby Genes

500 ntargD and astA are separated by 126 nucleotidesastA and astD are separated by 9 nucleotidesastD and SO0620 are separated by 167 nucleotidesSO0620 and SO0621 are separated by 74 nucleotidesSO0621 and SO0622 overlap by 4 nucleotidesSO0622 and SO0623 overlap by 20 nucleotidesSO0623 and crp are separated by 82 nucleotidescrp and SO0625 are separated by 419 nucleotidesSO0625 and SO0627 are separated by 159 nucleotidesSO0627 and SO0628 are separated by 171 nucleotides SO0617: argD - acetylornithine aminotransferase (NCBI ptt file), at 643,453 to 644,670 argD SO0618: astA - arginine N-succinyltransferase (NCBI ptt file), at 644,797 to 645,816 astA SO0619: astD - Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data), at 645,826 to 647,289 astD SO0620: SO0620 - conserved hypothetical protein (NCBI ptt file), at 647,457 to 648,260 SO0620 SO0621: SO0621 - sensor histidine kinase (NCBI ptt file), at 648,335 to 649,663 SO0621 SO0622: SO0622 - DNA-binding response regulator (NCBI ptt file), at 649,660 to 650,334 SO0622 SO0623: SO0623 - hypothetical protein (NCBI ptt file), at 650,315 to 650,662 SO0623 SO0624: crp - catabolite gene activator (NCBI ptt file), at 650,745 to 651,380 crp SO0625: SO0625 - conserved domain protein (NCBI ptt file), at 651,800 to 652,579 SO0625 SO0627: SO0627 - putative 2'-5' RNA ligase (NCBI ptt file), at 652,739 to 653,296 SO0627 SO0628: SO0628 - GGDEF domain protein (NCBI ptt file), at 653,468 to 655,654 SO0628
Locus Name Description Strand Phenotype
SO0617 argD acetylornithine aminotransferase (NCBI ptt file) + strong
SO0618 astA arginine N-succinyltransferase (NCBI ptt file) + strong
SO0619 astD Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) + strong
SO0620 SO0620 conserved hypothetical protein (NCBI ptt file) + sig.
SO0621 SO0621 sensor histidine kinase (NCBI ptt file) - strong
SO0622 SO0622 DNA-binding response regulator (NCBI ptt file) - insig.
SO0623 SO0623 hypothetical protein (NCBI ptt file) - sig.
SO0624 crp catabolite gene activator (NCBI ptt file) - strong
SO0625 SO0625 conserved domain protein (NCBI ptt file) + insig.
SO0627 SO0627 putative 2'-5' RNA ligase (NCBI ptt file) - insig.
SO0628 SO0628 GGDEF domain protein (NCBI ptt file) + insig.

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